Clostridium chauvoei: BTM20_12540
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Entry
BTM20_12540 CDS
T05083
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cchv
Clostridium chauvoei
Pathway
cchv03420
Nucleotide excision repair
cchv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cchv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BTM20_12540
03430 Mismatch repair
BTM20_12540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cchv03400
]
BTM20_12540
Enzymes [BR:
cchv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTM20_12540
DNA repair and recombination proteins [BR:
cchv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTM20_12540
MMR (mismatch excision repair)
Other MMR factors
BTM20_12540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
DUF3553
Nmad4
FOG_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
ATD55985
UniProt:
A0ABD4RIB8
LinkDB
All DBs
Position
complement(2714294..2716534)
Genome browser
AA seq
746 aa
AA seq
DB search
MDLKTLLNKEQYEGATTIEGQVLILAGAGSGKTRVLTYRMAHMIDDLGILPYKILAITFT
NKAAKEMKDRVKALIGDKADDMWISTFHSTCVKILRREIDKLGYKKSFTIYDTSDQKTLV
KECIKALNINDKDITEQEIMSKISKAKDRMQSPESFMRESESNFREKKIADVYDMYQKRL
KENNALDFDDLISKTVELFKKDKETLEFYQRKFQYIMVDEYQDTNGVQYELVRLLADKYK
NICVVGDDDQCIYQWRGADITNILDFEKDYPNTKVIKLEQNYRSKGNILDAANVVIVNNS
NRKDKALRTEQEPGNKIKIYRAYSDSDEGDFVATQINKIKSDEEKKFKDFAILYRTNAQS
RIFEESLRRKSIPYKILGGTRFYDRKEIKDMICYLKTLINPSDSISLRRIINVPKRGIGD
ATINKVVDFADDYELQLWDALSEVRSIPTLTPRNCGGIEAFMEMMEHFMDLSETVPVSVL
IETILKETGYISELEKSKDIEDKSRIENLKELVSDAVDFERSSEDKSLLAYLEKVSLVQD
TDKLEEEEDTIVLMTVHSAKGLEFPVVFMVGMENGIFPGNASFEKESEMEESRRLCYVGI
TRAKETLFMTSAEVRRQFGRTVAYAQSDFIAEIKQELKEYVTGENGSVASRNKMFQRNAA
YSNPHSLRNNITSNKEVSGVNISHGSTSGNITNEEATVGRKVKHEKFGVGTIVSATNSGS
DKKLTIAFDNQGIKILLLSLAKLELL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaacattactaaataaagaacagtatgaaggtgcaactactattgaaggt
caagttttaatactagcgggggcaggttctggaaaaactagagttttaacttatagaatg
gcgcacatgatagacgatttaggaatactgccatataagatattagcaataacttttact
aataaggcagccaaggaaatgaaggatagagttaaggctttaattggagataaagcagat
gatatgtggatatcaactttccattcaacttgtgtaaaaatcttaagaagagaaatagat
aagttaggatataaaaaaagttttacaatatacgatacttcagatcaaaaaacacttgtg
aaagagtgtattaaggcacttaatataaatgataaagatataacagagcaagaaataatg
agtaaaataagtaaagcaaaggatagaatgcaaagtcctgaaagctttatgagagaaagc
gaaagcaattttagagaaaagaaaatagctgatgtatatgatatgtatcaaaagagatta
aaagaaaataatgctttagattttgatgatttaatatcaaaaacggttgaattgtttaaa
aaagacaaagaaactttagaattctatcaaagaaaattccaatatattatggtagatgaa
tatcaagatactaatggagttcagtatgagcttgtaagacttcttgcagataaatataaa
aacatttgtgttgttggagatgatgaccaatgtatttatcaatggagaggagcagatatt
actaatatattagactttgaaaaggattatcctaatactaaggttattaaattagagcaa
aattaccgttcaaaaggaaatattctagatgcagcaaatgttgttatagttaataattca
aatagaaaagataaagctcttagaacggaacaagagcctggaaacaaaataaagatttat
agagcttattcagattcagatgaaggggattttgtagctactcaaataaataaaataaaa
agtgatgaagagaaaaagtttaaagattttgcaatactttatagaactaatgcacaatca
cgtatatttgaagaaagtctaagaagaaaatctataccttataaaatattaggtggaact
agattctacgatagaaaagaaattaaagatatgatttgttacttaaagactttaattaat
ccatcagatagtattagtttaagaagaataataaatgtacctaaacgaggaattggagat
gcaactataaataaagtagtggattttgcagacgattatgaactacaattatgggatgca
ttatcagaagtaagaagtattccaacattaactccaagaaactgtggtggaatagaagcc
tttatggaaatgatggaacactttatggatttaagtgaaacagttccagtttcagttctt
atagaaactatattaaaagaaactggttatatttcagaattggaaaaatcaaaggatata
gaagataagagtagaattgagaacttaaaagaattagtatccgatgctgtagattttgaa
agatctagtgaagataaaagtttattagcttatttagaaaaagtatcattagttcaagat
acagacaaattagaagaagaagaggatacaatagttttaatgacagttcatagtgctaag
gggttagagttcccagtagtatttatggttggaatggaaaatggtatttttccagggaat
gcatcttttgaaaaagaatcagagatggaagaatcaagaagactttgttatgttggaata
acaagagctaaggaaacattatttatgacatcagctgaagtgagaagacaatttggtaga
actgttgcatatgcacaatctgattttattgcagaaataaaacaagagcttaaagaatat
gtaacaggggaaaatggttcagtagcatcaagaaataaaatgttccaaagaaacgctgcg
tatagtaatccgcatagtttaaggaataatataacttcaaataaagaagtatcaggagtc
aatatatctcacggttcaacatcaggaaatattactaatgaagaggctacagtaggtaga
aaagtaaaacatgaaaagtttggagtagggactatagtatcagcaacaaattcaggttca
gataaaaaattaactatagcctttgacaatcaaggtataaaaatactattattatcttta
gctaagttagaattactttag
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