Coprinopsis cinerea: CC1G_00230
Help
Entry
CC1G_00230 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cci
Coprinopsis cinerea
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cci03036
]
CC1G_00230
Chromosome and associated proteins [BR:
cci03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CC1G_00230
microRNA pathway
RISC loading complex
CC1G_00230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
6013650
NCBI-ProteinID:
XP_001837094
UniProt:
A8NX83
LinkDB
All DBs
Position
5
AA seq
1499 aa
AA seq
DB search
MERTQSSLTGKRSRKVDGSGPQRPAKHFKGENDESIRKRLPELAAGAAYAESDIDELRSS
ILDTAKHSNTIAYLPKSSNIDPICYDFLCWAVDASRSHPADPRRVSLFVVENESSLDAHA
LFIQKTIPDVICFTCTSDALKRDKSLNLLGHDVIVTTSQTLLELFSKDLVQLRQVQVVII
EDAQHVKAHDCYSFLPIVQFMRLFYSPCPAYERPRLFSLVLSPDLAQHPFDSRSLKLEIT
LHSKTYGVTEEKRTEIIDLPDRPNEVVVLYDKSASLETTFSSLPSQLRALDPKMTVIRKR
LHEAELIETQIGPCAAELWLKMSLEEFGRDMPVSSEAPKDDVGGTKLLEARICEKIRNWS
CTPPELNPSSPGFNVTHKFLRFLQALDACLDYGAQFRAVIFVQRKSTALALAEIIKHLPD
GRFKFISPCSVFGKSRLETQQETFTNFASGVYNLLVVTRSAMELDIPKATVVVRFDLMDS
QFLYGQIKACARGRESHLIHLVERHNDSHRRILSNAASDAERLFEWFDGLRDPEGLVVPP
ANLKESSMSYYSESDEDIDKPDYVSAATTGGRLYPQDAIVTLVKFASYLREQGYLEAGHS
LFEYQSIPANPGQPLQFACKISLPGTPVDGMVSAPEMTKTISRRAAAFSACKRLASLGLL
DYRIVPLPSTPQVLGPSATNPTEKGTRRYFRKQPEFWKHGSTGPVSVLHPMVICVEGNAA
FGPLLLFTRQPMPSMPSFNLFSNGDPVKVAFHRGSPFKPEPEEMDIIYGFTLRLVKMCLN
KPVTCPVNEATYFFGALSRSWAPRDTQDIFRRDIAKDIDWELMSRSATKWAVPITISAAP
DMQEDLADAVIQDRFLEFTRRYHVVKLRQDMTPMSKPVDSKREQGTKISQFLKSASSPPW
RIISIRRTEKEGHQTKGQQNANLIPELCAKCTIPASMFRTSYLIPSILWKLDHLFVVKEL
NMQFFDNAIDEELLYMATTTVSAEMEHNYERLELLGDAFLKYLASVVVFVMNPTQNEGSL
HVARQRLISNKALLACATQVGLPAYICSKPFLLRGWRPWPSASFTEISKAPDKPGTGVAE
QEVDTCKARAQNESAGESQTPPSADHDKQDSDQEVEEGAKTESSQKKRKRKKWKDPMNQN
LQNLGDKKAIADVTEAIIGAAYVSGGRETALDVAKALSIPIPGINTWSDLGMQVVIPFTT
DAIELRPGSIEAVEGIIGHRFQQPHLLAQILTHTSVHGSKVLTYERLEFIGDAILDFMVI
RHIFDRERTLSPGGLTMLKGAMVANSTLATVCILSGIYKHLVFGSYQLSSAIEDYAEAIN
ERADKEYALAEQENRMPGQFWPDIEPPKALSDVIESIIGALYISDNFCPVGTEAFFDKVL
RPFFDKHISLRTLTHHPTKTLFEYIQAHGCQQLKLSKGPQQKGGKMSCEILVHETVCASA
SDVSLSVAAREASTRALDRFKEDGDFLFKLCDCRTGGQNKGGQVNKGFEHALSSLEQGG
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcacgcagagctccctcaccggcaagaggtcgaggaaggtggatggctctgga
ccccagcgacctgcaaaacattttaaaggagagaacgacgagtctataagaaaacgctta
ccagaacttgctgctggtgctgcatatgcagagtctgacattgatgaacttcgttcctcc
atacttgacaccgcgaagcattcgaatactatcgcttatcttcccaagtcgagcaacatt
gatcctatatgctacgacttcttgtgctgggctgtcgatgcctcgaggagtcacccagca
gaccctcggcgcgtatctttattcgttgtcgagaatgaatcctccctggatgctcatgcg
ctcttcatccagaaaactatcccggatgtgatttgcttcacctgtacttctgatgcattg
aaaagggacaagagtttgaatttgctaggccacgacgtgattgtgacgacgtcgcagaca
ctcttggaactgttctcgaaggatcttgtccaactgcgtcaggttcaggtcgtgataatc
gaagatgcacaacacgtgaaggcccatgactgctactcctttcttcccatcgtccaattc
atgaggctcttttattcaccatgccccgcttacgaacgacctaggctcttctcgttggtt
ctaagcccggacctagcgcaacaccccttcgattcaaggtccctgaaactggaaataacg
cttcactcgaaaacctatggtgtcaccgaggagaaaagaaccgaaattatcgatctaccg
gacaggcctaacgaggtggtggttctctacgataaatctgcatcactcgagacgaccttt
agttcactgccctctcagctgcgggcactggatcctaaaatgacagtcattcggaagcgc
cttcatgaagctgaactcatagaaactcaaatcggaccttgcgctgcggaactttggctc
aagatgtctcttgaggagttcggacgagatatgcccgtgtcttcggaggctcccaaagac
gatgtaggcgggacgaagcttctcgaggctcgaatatgtgaaaaaattcgaaactggagc
tgcaccccgccagagttaaacccctcatcgcctgggttcaatgtcacccacaaattcctg
cgattcctacaggcccttgatgcctgtttggactatggtgcacaattccgtgcggtgatt
tttgtccagagaaagtcaacggcgttggcactggctgaaataatcaaacacctccccgat
ggtcgtttcaagtttatctcgccgtgcagcgtgtttggaaaatcccgacttgaaactcag
caagaaacgttcacgaactttgcatcgggagtatacaacctattagtggtgacgcggtca
gcaatggagcttgacattcccaaggccactgtcgtcgttcggtttgacttgatggacagc
cagtttctctatggtcagatcaaagcctgtgcccgaggaagagagtctcatcttatacac
cttgttgaacgacacaacgattcacaccgccggatattgagtaatgctgcctccgacgcc
gagaggctttttgaatggttcgatggcctgcgcgaccctgaagggctggtggtcccccca
gccaatctcaaggagtcgtcaatgtcgtactactcagaaagtgacgaggacatcgataaa
ccggattacgtatcagcagcgactacgggtgggcgactttatccccaggatgctatcgta
accctcgtaaaatttgcctcttatcttcgggaacaaggctacctagaagcgggtcactcg
ctattcgaataccagtcaatccccgcgaatccgggccagcccctccaatttgcttgcaaa
atctccctcccaggtaccccggtagatggcatggtatcagctcctgaaatgacgaagaca
atttcccgacgtgcagcagcgttctctgcatgcaaaaggctggcgtccttggggctcttg
gactatcggatcgtcccgttaccatcgaccccgcaggttttagggccttcagcaacaaat
cctacggaaaaggggactcgacgatactttcggaaacaacctgaattctggaagcatggc
agcactgggcctgtcagtgtgcttcatcccatggtcatatgcgtagaagggaacgccgct
tttggccctctcctccttttcactcgacaaccgatgccatcgatgccttcattcaatctt
ttcagtaacggagatcctgtcaaggtggcctttcatcgaggctctcccttcaagcctgag
cctgaagaaatggacattatctatggcttcacccttcgccttgtcaaaatgtgtctcaac
aaaccggtgacatgtcccgtcaacgaggcaacttatttcttcggcgctttgtccaggtcg
tgggctcctagagatactcaagacatctttcgtcgtgatatcgccaaggacattgactgg
gaactgatgtcccgttcagcgacgaagtgggctgtcccaatcacgatttctgcggctccc
gacatgcaggaagacttggcggacgcggtgattcaggatcgcttcctcgagtttacacga
cggtaccatgtcgtcaagctccgtcaagatatgaccccgatgagcaaacccgtggacagc
aagcgggaacaaggcacgaagatcagccaattcttgaagtcagcctcatcccccccgtgg
cgaataatctccatccgaagaacagagaaggagggccatcagacgaaagggcagcaaaat
gcaaatctgattccggaactgtgcgccaaatgcactattcctgccagcatgttccgaaca
tcatatctaatcccatccatactatggaaactcgatcatttgtttgtggtcaaagaattg
aacatgcagttctttgacaacgctatcgacgaggagttgctgtacatggccacgacgact
gtttctgccgaaatggaacacaactatgaacgtctggagctcctgggtgacgcgtttctc
aagtatctcgcctcggtggttgttttcgtcatgaatccaactcagaatgaaggctcgctc
catgtagcacggcaaaggctgatcagcaacaaggcgctgcttgcttgtgccacgcaggtg
ggcctaccggcatatatctgttcgaagcctttccttctcaggggttggcgcccttggccc
tccgcgtcgttcactgagatttccaaggcacctgataagcctggaactggtgtggccgaa
caggaagtggatacgtgcaaagcgcgggcacaaaacgaatccgcgggagagagccaaaca
cccccgtcggcggaccatgacaaacaagatagtgaccaggaggtggaagaaggtgccaag
accgaaagtagccagaagaagaggaaaaggaagaagtggaaggatccaatgaaccagaat
ttgcagaacctaggtgacaagaaggcaatagcagacgttacggaggccatcattggtgct
gcttatgtgtccggggggagggagaccgctttggacgtcgcaaaggccttgtcgattccc
atccccggtattaacacgtggtcggatttgggcatgcaggttgttatacctttcacaact
gatgctatcgagttacgtccaggttcgatcgaagcggtcgaagggattattggacatcga
ttccagcagcctcatctcctcgctcagattctcactcacacatcagttcatggaagcaaa
gttttgacttacgagagactagagtttatcggtgacgccatcctagatttcatggtcatt
cggcacatatttgatcgggaaagaacattatcacccggtgggctgacgatgctgaagggc
gcgatggttgcgaattcgacgctggccacggtctgcatcctgagtggaatttacaaacat
cttgtctttggctcctaccagctatcttctgcaatcgaggactacgctgaagcgattaat
gagagggcagataaggagtatgctcttgctgaacaagagaaccgaatgccaggacaattc
tggccggacatcgagcccccaaaggctctgtctgatgtgatagagtctatcattggggcg
ttgtacatttcagacaacttctgccctgtcgggacagaagcattcttcgacaaagttttg
cggccgttctttgacaagcatatcagcttacgaactctgacccatcaccccacgaaaacg
cttttcgagtacatccaggcgcatggttgtcagcagctcaaactcagcaaaggaccccag
caaaagggagggaaaatgagctgcgaaattcttgtgcatgaaactgtgtgtgccagcgca
tcggatgtctcgctttcggtagccgcccgagaggcgtccacacgcgccctggatcggttc
aaagaggacggcgactttttgttcaaattgtgtgattgtcggaccggtgggcagaacaag
gggggacaggttaacaagggtttcgaacacgcgttgtcctcgttggaacagggtggttga
DBGET
integrated database retrieval system
