Coprinopsis cinerea (gray shag): CC1G_00285
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Entry
CC1G_00285 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC1G_00285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_00285
03016 Transfer RNA biogenesis [BR:
cci03016
]
CC1G_00285
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
CC1G_00285
Transfer RNA biogenesis [BR:
cci03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
CC1G_00285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
YpzG
AIR2-like_ZnK4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
6013705
NCBI-ProteinID:
XP_001837149
UniProt:
A8NXF0
LinkDB
All DBs
Position
5
AA seq
545 aa
AA seq
DB search
MASVKEAVEIIDLTGDSASTLVAHEESASNFDQVILPTQEDGPPNQENDSVQANSNKNTT
SSSSSKRKRRRRSEAVAKAQDVDSDQSANAEDNNLFFVDTAPIPLPNIPLQPEEQSKDEN
LPEDKLLLPAHVTVFGSAPIEILPPPTSLEDDSIQFLDYDDNKVFRRYWEDQEPIKNATR
VVCKHCGAEGQHKTYECTVVICLTCGARDDHPTRSCPISKVCFSCGMKGHINATCPNRYG
NGVRISSRFVDCERCSSTQHKTNECPTWWRMYAYLSDVAQVNVLALRREKRDCKLGEGGE
GYIAEDQWCYSCGNSGHLGDDCPENSQFNQDHEHSAFSMYNVASGPFYDPEKEASNSKKA
QSRPRPKESFMDLERVPDDVGRRGKEKAKSRLGKMTAKVDDDPDDWFSKASKPSDKSQSK
KPKSIQFSDSLRNKKRGFDQINGTSKTSLLDRLGDSFFDEANGNDSQGGRGSKRSKKKKE
KEGSDDYNSRRDSYRGSHRNGHQSNGNAKRDWDSDWDRTRGKDRDRDRGSHDNPHRPRYK
GGYSR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgttaaagaggcggtggaaattattgacctcactggggactccgcgtcgacg
ttagtggcccacgaagaatccgcatcaaactttgatcaagttattttaccaacgcaggag
gacggtccaccaaaccaggagaacgatagtgttcaagccaactccaacaagaacacaacc
tcgtcctcctcttcgaaacgaaagcggcgccgtcgttcagaagctgtcgcgaaggcacaa
gatgtggactccgaccaatctgcaaacgctgaagacaataatctgtttttcgttgacacc
gcgccaatacctctcccgaacatccctctgcaacctgaagaacagtcaaaagatgaaaac
ttgccggaggataaactcttgcttccggcacatgtcactgtctttggctcagccccaatc
gagattcttcctccaccgacaagtctcgaagacgattctatccagtttttggattatgat
gataacaaggtgttccgcaggtattgggaagatcaggaaccaattaagaatgcgaccaga
gtggtttgcaaacattgtggagcagaaggacagcacaagacatacgaatgcactgttgtg
atatgtttgacctgcggagcccgagatgaccatccaacacgctcttgtccaatcagcaaa
gtatgcttttcttgcggaatgaaggggcacatcaacgctacatgccctaaccgttatgga
aacggggtgcgcatctcgtcacgttttgtcgactgtgaacggtgctcctcaacgcaacac
aaaaccaatgaatgtcctacttggtggaggatgtatgcgtatctctccgacgtggcccag
gtcaacgttcttgcccttcgaagggagaaacgtgactgcaagcttggagaagggggagaa
gggtacattgcagaggatcaatggtgctatagctgcggcaattcaggtcatcttggagac
gattgccctgaaaatagtcaattcaatcaggaccacgagcactcggcattcagcatgtac
aacgttgcttccggaccattctacgatcctgagaaagaggccagtaactcgaagaaagcc
cagagccggccccgtcccaaggagtcgttcatggatttggaaagggttcctgatgatgtc
ggtcgaagaggaaaggagaaagccaagtcgaggctcggaaaaatgactgcaaaggttgac
gacgatccggacgactggttcagcaaagcatctaaaccatcggacaaatctcagtcgaag
aaacccaaaagcatccaattctcagactcattacggaacaagaaacggggctttgatcaa
atcaatgggacctccaagacgagcctgctggatcgtttgggcgattcgtttttcgatgaa
gcgaatggcaacgactcacagggtggcagaggttctaaacggtcaaagaagaagaaagag
aaggagggcagcgatgattacaactctcgccgggatagctacaggggctctcatcggaac
ggtcatcaatccaatggcaacgcgaagcgcgattgggatagcgattgggacaggacgaga
ggcaaggatagggatcgggacagaggtagccacgacaaccctcaccgcccgcgatataag
ggtggatattcgagatag
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