Coprinopsis cinerea (gray shag): CC1G_00318
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Entry
CC1G_00318 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CC1G_00318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_00318
03041 Spliceosome [BR:
cci03041
]
CC1G_00318
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CC1G_00318
Spliceosome [BR:
cci03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CC1G_00318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Mod_r
KIF21A
GCIP_C
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
6013738
NCBI-ProteinID:
XP_001837182
UniProt:
A8NXJ0
LinkDB
All DBs
Position
5
AA seq
208 aa
AA seq
DB search
MADSAAFQFYASADEVFTKLREIVESSPPENDAAALQIVAMALIGRLKSLNRAANTATRL
QKEATTEARQEMDQSHLGLQNLLYEKRHLEREIEKCRQFASIYQDVPLHTLEEFKVLAPE
EARTPEVLANEHELMLNRLSFELAERQRLDQRKRDLIRQKEDLLRQSKAKASTMDSVKAQ
IELLVKTAAEVQKKVDDLVSPIPKPSSS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgattccgccgcctttcagttctacgcctccgctgacgaggtcttcaccaaactt
cgcgaaattgtcgagtcttctcccccagaaaacgatgctgcagccctccaaatcgtcgcc
atggccctcataggtcgcctcaagtccctcaaccgtgcggcgaatacagcgaccagactc
cagaaagaggccaccaccgaagcccgtcaagagatggaccaatcgcatctcggtctccag
aaccttctgtatgagaaacgtcatcttgagcgcgaaatcgaaaagtgtcgccaatttgcc
tcgatataccaggacgttccgctgcataccctcgaggaatttaaggtgttggcaccagag
gaagcacgtacacctgaagtgttggcaaacgaacatgaacttatgctcaaccgcctcagc
tttgagctcgcggaacgccagcgcctagatcaaaggaaacgagatctcatccggcaaaag
gaagatctgctcaggcagagtaaggccaaggcctcgacaatggacagtgtcaaagcccaa
attgagttattggtcaagactgctgcagaagtacagaagaaagtcgacgaccttgtatca
ccaatacccaaaccatcctctagttaa
DBGET
integrated database retrieval system
