Coprinopsis cinerea (gray shag): CC1G_00430
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Entry
CC1G_00430 CDS
T01275
Name
(RefSeq) pre-mRNA-processing ATP-dependent RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC1G_00430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cci03041
]
CC1G_00430
Enzymes [BR:
cci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CC1G_00430
Spliceosome [BR:
cci03041
]
Complex A
U2 snRNP components
U2 related factors
CC1G_00430
Complex B
CC1G_00430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
6013851
NCBI-ProteinID:
XP_001837294
UniProt:
A8NXX3
LinkDB
All DBs
Position
5
AA seq
1081 aa
AA seq
DB search
MARRDRSESPDTPNKRVRSSYRSPRSPSPTRRSTQRAPTHRSRYDDDRDRDRDRDRDRDR
DRYRDRDRDYRDRDRERHRDDRYRDDRRRDYRDRDVRDDRRDDRRRSRSRDRKAHTPPTS
KPQPSTAAVTAQSTPTPTPPPEDEKLKAKRAKYEAWKKEREAKKALDSAKAKAMALAGKA
APVATSSSSGNTTQTSRPALTGLGLKGLPLKPDFSSAKGLGASLDDSVESKRKLEKLEDM
PAIDMTMKDTAIGDLEGDDDDEEANRMDQALKAKSKDAMDVDEEEIDPLDAFMSEVKEEV
KKVNMQDAQKMLNSNGPGRSKIRLDDRMGDEGSDDEQEAAPDELDATDLNPEDILALAAK
KAKKKELAVVDHSKVQYEPFRKEFYIPPPDIASMTEDEAELLRLALDGIKIRGVDCPKPV
IKWSHFGLPASCIEVIKRLNYTAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLF
RHIKDQRPLEQMEGPMALVMTPTRELAVQIHKDCKPFLKVLGLRAVCAYGGSPIKDQIAE
LKKGAEIIVCTPGRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIINNIR
PDRQTVLFSATFPKQMDSLARKILRKPLEITVGGRSVVAAEIEQIVEVRAEDTKFNRLLE
ILGQMYNDDPECRTLIFVDRQEAADNLLRDLMRKGYLCMSLHGGKDQVDRDSTIADFKAG
VVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQE
RYSVDIYRALKASEATIPKELEDLANGFLEKVKAGKAQAAGSGFGGKGLDRLDKERDARE
RAERKAYGEGEDEKPATTTEETTTKQADDMTFGNFKVEIKRGPAPDSSKALLGVGGAVAA
AKRLAHAKEEERIQSQMRAAEEAAARAGKDTAAHKQALSVVAKLNAQLRASKMVLQSQLQ
HEEALSTGRKTNPDATDFHAIIPINDYPQKARWRVTNKETMVQLIDMTGASVTNKGIYYE
PGKEPPPEGPPKLHLLIESNEEWRVEQAVREIKRLLIEASAAALQAEMRNPTATSGRYTV
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaagggataggtcagaatccccagatacaccaaacaaacgggtaagatcgtct
tatcgctctccacgctccccctcgccgacgaggcgcagcacccagagggccccaacacac
cgctcccgctacgacgacgacagggatagggatagggatagggatagggatagagataga
gacaggtacagggaccgcgacagggattaccgcgaccgcgacagagagcgacaccgtgac
gacagatatcgtgacgacagaagaagagattatcgtgaccgggacgttcgcgatgacagg
agagacgaccgccgccgttcacgctcccgggaccgcaaagcacacacaccacctacttcg
aagcctcagccttccaccgctgcggtcaccgctcaatcgactccaacccccacaccacct
ccagaggacgaaaagctgaaggccaagcgcgcaaagtacgaagcatggaagaaagagcgc
gaggcaaagaaagctctggattcagccaaggcgaaagccatggctttggccggaaaggcc
gcaccagtagcgacatcgagttcgagcggaaacactacccaaactagccgaccggccttg
actggcttgggactgaaaggtcttcctctcaagcccgacttttcctcggcaaagggcctc
ggtgcttctctcgacgactctgtagaatccaaacgcaagctggagaagctcgaagacatg
cctgctattgacatgacaatgaaggatactgcaattggcgacttggagggggatgatgac
gacgaagaggccaacaggatggatcaggcgcttaaggccaagtccaaggacgctatggat
gttgatgaggaggaaattgacccactcgacgcattcatgagtgaagtaaaggaggaagtc
aaaaaggtcaatatgcaggacgctcagaagatgcttaactcgaatggccctggccgctcc
aagattcgactagacgaccgcatgggggatgaaggctccgacgacgagcaggaagctgca
ccggacgaactggacgcaaccgacctcaacccagaagatatcctcgcccttgcagccaaa
aaggccaaaaagaaggagctcgccgtagtggatcacagcaaagtgcaatatgagcctttt
agaaaggagttctacatcccccctccggacatcgcttccatgaccgaggacgaagctgaa
ttgcttcgacttgccctagacggaatcaagattcgtggcgtggactgccccaagcctgtg
atcaaatggagccatttcggtctgcctgcttcttgtatcgaagtcataaaacgcctcaat
tacactgctccgacttccattcaagcgcaggcaattcctgccatcatgtctggtcgtgac
gttattggtgttgctaaaactggttcaggaaaaacgattgctttcctgcttccgctattc
cgccatatcaaggaccagcgtccgctcgagcaaatggaggggccgatggcgctcgtcatg
acacctacacgtgaattggcagtgcagatccacaaggactgcaaacctttcttgaaggtc
cttggtctgagagctgtttgtgcatacgggggctcccccatcaaagaccagatcgcagag
ttgaagaagggcgctgaaatcatcgtctgcactccgggacgcatgatcgaccttttgacg
gccaactcgggacgcgtcaccaacctcaagcgagtcacctacgttgtgcttgacgaagca
gatcgtatgtttgacatgggtttcgaaccccaggtcatgaagatcattaacaacatccgt
cctgacaggcagacggtccttttctccgccacattccccaaacaaatggactctctggcc
cgaaagattctgcgcaagcccttggagattaccgttggtggtcgctcggtagtcgcggcg
gagatcgagcagattgtcgaggttcgcgctgaggacaccaaattcaaccggctccttgag
atcctcggccaaatgtacaatgacgaccccgagtgcagaaccctcattttcgtcgatcga
caagaagcagccgacaatctcctccgggatctcatgcgcaaaggttacctctgcatgtct
ttgcatggcggcaaggaccaagtcgatcgtgattctaccatcgctgacttcaaggccggg
gttgttcccatcgttatcgccacttcagttgctgctcgtggactcgatgttaaacaactg
aaactcgtcatcaactacgatgcacccaatcacatggaggactatgtccaccgagctggc
cgaacgggtcgtgccggaaacaagggaacttgcgtcaccttcatcacgccggaacaagag
cgctactccgtcgacatatacagagctcttaaggcgagcgaggccactattcccaaggag
ttggaggacctcgccaacggattcctcgagaaagtcaaagcaggtaaggctcaggccgct
ggttcaggtttcggtggaaagggcttggaccggctggacaaggaacgagatgccagggag
cgggcagagcgaaaggcctatggcgaaggcgaagacgagaaacctgccaccactaccgaa
gagacgacgaccaagcaggccgacgatatgacttttggcaacttcaaggtcgaaatcaaa
cgcggtcctgctccggattcatcgaaggctcttctcggagttggcggagccgttgctgcc
gccaaacgtcttgcccatgccaaagaggaagagaggatccagagtcagatgcgtgcggcg
gaagaagctgcggctcgtgctggcaaggatactgctgcccacaagcaggctttgagcgtt
gtcgccaagttgaatgcccagctcagagcgtcgaagatggtcctacaatcccaactgcag
cacgaggaggccctcagcaccggacgcaagacaaatccagatgccaccgatttccatgct
attattccgatcaacgattatcctcagaaagctcgttggcgtgtcaccaacaaggagact
atggtccaactcatcgatatgactggtgcctctgtcacgaacaagggtatctactacgaa
ccaggcaaggaacccccaccagaaggccctccgaaacttcatctactcatcgagtccaac
gaagagtggagggtcgagcaagcagttcgcgaaatcaagcgtctgcttatcgaagcttca
gccgccgcgttgcaagccgaaatgcggaaccccactgccaccagtggaagatatactgtt
ttgtag
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integrated database retrieval system
