KEGG   Coprinopsis cinerea (gray shag): CC1G_00847
Entry
CC1G_00847        CDS       T01275                                 
Name
(RefSeq) U4/U6 snRNP-specific spliceosomal protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC1G_00847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cci03041]
    CC1G_00847
Spliceosome [BR:cci03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CC1G_00847
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th PRP4 Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_IFT140_1st WD_LRWD1 RMC1_N WD40_like Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 6007769
NCBI-ProteinID: XP_001831300
UniProt: A8N8X2
LinkDB
Position
7
AA seq 515 aa
MAELTYDTLVDDGNYLGSERARLENQVILDELERKKKARGIAAPTDDNKVKARLREIGEP
ITLFGERAADRRDRLIYVLSQINAARGDDQMAVDEESSSESEEDEQEEFYTPGSLELLEA
RRRIAEYSLPRAQKRIAQQRLDSKLDLGRIVDIRKKVFAEVKKFSNLGSQIGDERPIAQV
RFAPNNKILATGSWSGTVKLWNVPECTEIKALRGHTDKVGGVAWHPQATLSLSPDVVNLA
SGAGEGNVNLWSLNNDQPVSVMSGHQDRVCRVAFHPSGDYVASASFDTTWRLWDVNTAKE
LLLQEGHSKEVYSVEFQTDGALIASGGLDAIGRVWDLRTGRTAMVLDGHVQAILAMAFSP
NGYQVATGASDDTIRVWDMRSIKPLYTIPAHLSNVSDIRFFHANDLFFKNQPSPSSDVEM
KDQSEDENPDAQKPDSESELKWSEEEWRYRSGLFFASAGYDGLVKIWSADDWQLLRTLST
DAGKVMSVDITSDGDMIASGTYNRNFQLFAPEEIA
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggcggagctcacctacgacacccttgtcgacgatggcaactacctcggttctgaacgc
gctcgcctcgaaaaccaagtcattctagatgaactcgaacgcaaaaagaaggcgcgaggc
attgcagcgccgacggacgataataaagtcaaagcaaggctgcgtgaaatcggagaacct
ataacgctgttcggtgaacgtgcagcagacagacgagaccgtctaatttatgtgctatcg
caaatcaatgctgcaagaggcgacgaccaaatggcggtggatgaagaatcatccagcgag
agcgaagaagacgagcaagaagagttctatacaccggggtctctggaattgcttgaagca
cgaagacggatagcggagtattctctccccagagctcaaaagcgcatcgcccaacagcga
ctagacagtaaactcgaccttggtcgcatagtcgatattcgcaagaaggtctttgccgag
gtcaagaaattctcgaatcttggctctcaaatcggcgacgaacggcctattgcgcaagta
cgctttgcacccaacaacaaaattcttgcgacaggaagttggtcgggaactgtaaagctg
tggaatgtaccagagtgcacggaaatcaaggcactgcgaggtcatacagacaaggtcggc
ggcgttgcatggcatcctcaggcgacgctttccctatccccagacgtggtcaaccttgca
agtggtgccggtgaaggaaacgtaaacttgtggtcgttgaacaacgaccaacctgtctct
gtgatgtcaggccaccaagaccgcgtatgccgtgtcgccttccacccttcaggcgattat
gtcgcaagcgccagtttcgacacgacatggagattatgggacgtcaatactgccaaagag
ctcttgctgcaagaaggccattcaaaggaagtctattcggtggagttccagacggacggt
gcccttattgcctctggtggattggacgcgataggtcgcgtatgggatcttcgaacaggg
cgaacagcgatggtactggatggacatgtacaagctatcctagctatggctttctcacca
aacggataccaagttgccacgggtgcaagcgacgacacaatccgcgtctgggacatgcgg
tctatcaaacccctgtacaccatccccgcccacctctccaacgtctccgacatccgcttc
ttccacgccaacgacctcttcttcaagaaccagccgtcaccctcctctgacgtcgaaatg
aaagaccagagcgaggatgagaaccccgacgctcaaaagcccgattccgagtcagaattg
aaatggtcagaagaggagtggaggtaccgttctgggctgttctttgcttcagcaggctat
gatgggctggtgaagatctggagtgcggatgattggcagcttttgagaacgctttcgacc
gatgcaggtaaagtcatgtcggttgacatcacgagcgatggggatatgattgcgtctggg
acgtacaaccgtaacttccagctctttgctcccgaagagattgcatga

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