KEGG   Coprinopsis cinerea (gray shag): CC1G_00877
Entry
CC1G_00877        CDS       T01275                                 
Name
(RefSeq) DNA replication factor
  KO
K10756  replication factor C subunit 3/5
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03030  DNA replication
cci03410  Base excision repair
cci03420  Nucleotide excision repair
cci03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CC1G_00877
   03410 Base excision repair
    CC1G_00877
   03420 Nucleotide excision repair
    CC1G_00877
   03430 Mismatch repair
    CC1G_00877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cci03032]
    CC1G_00877
   03036 Chromosome and associated proteins [BR:cci03036]
    CC1G_00877
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_00877
DNA replication proteins [BR:cci03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CC1G_00877
  DNA Replication Termination Factors
   ELG1-RFC complex
    CC1G_00877
Chromosome and associated proteins [BR:cci03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CC1G_00877
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CC1G_00877
  Check point factors
   HRAD17(Rad24)-RFC complex
    CC1G_00877
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_30 AAA_11 DUF815 RCF1-5-like_lid AAA_assoc_2 AAA_24 AAA_22 AAA_19 DEAD T2SSE RuvB_N ResIII AAA_16 AAA_5 AAA_3 AAA_7 Viral_helicase1 ATPase_2 AAA_28 AAA_33 nSTAND3 MCM DNA_pol3_delta Mg_chelatase Methyltransf_31 PIF1 bpMoxR DNAX_ATPase_lid SLFN-g3_helicase RNA_helicase
Other DBs
NCBI-GeneID: 6007801
NCBI-ProteinID: XP_001831330
UniProt: A8N902
LinkDB
Position
7
AA seq 347 aa
MSGVETAFPTKNKGKGKAADVSEEVDNLPWVEKYRPVSLEDVVSHQDITTTIDRFIEKNR
LPHLLFYGPPGTGKTSTILAVARRIYGSDYKKQILELNASDDRGIDVVREQVKQFAETRT
LFSKGYKLIILDEADMMTQQAQAALRRVIEQYTKNVRFCIICNYVNKIAPAIQSRCTRFR
FSPLPIAEVEKQVNRVVEAENVQLTPEGKQALLKLSKGDMRRALNVLQACHAAYDVISES
EVYNCTGHPHPQDIEAIVNSMLSDEFTTSYQMISKLKTERGLALQDLIAGAYEYLETIEI
KPNARVYVLDLLATTEHRLSTGGNEKMQLTALLSAFKGAVELSARSA
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtctggtgtcgaaacggcgttcccgaccaagaacaaggggaaaggaaaggctgcagac
gtttctgaagaggtggacaacttgccatgggtcgagaaataccggcctgtgtccctggaa
gacgtcgtctcccaccaggatatcaccacgaccattgaccgattcattgaaaagaatcgc
ttgccacatctcctattctatggacctcctggtaccggaaagacatccaccattctcgcc
gttgcacgtcggatatacggatccgattacaagaaacaaattctagagttgaacgcatcc
gacgaccgaggcattgatgttgtcagagaacaagtcaaacagtttgctgaaacccgaacc
ctcttctcaaagggatacaagctgatcatcctagacgaagccgatatgatgacccaacaa
gctcaagctgcactgcgccgagtgattgaacagtatacaaagaacgttcgcttctgtatc
atctgtaactacgtcaacaagattgctcctgcaatccagagtcgatgtacacgattccgc
ttctcgcctctacccattgccgaggtcgagaagcaggtcaacagagtcgtcgaggcagaa
aacgttcaattgacgcctgaaggaaagcaagctctcctgaagctctcaaagggtgatatg
cggcgagctctaaacgttcttcaagcttgtcacgctgcctacgatgtgatcagcgagagc
gaagtctacaactgcacaggccatcctcatccacaggacatcgaggccatcgtcaactct
atgctttccgacgagttcactacctcgtatcaaatgatatccaaactgaaaaccgagcgg
ggtcttgcactgcaagatctgatcgccggggcttacgagtacctcgaaacgatcgaaata
aagccaaacgcccgagtctacgtgctcgatctattggctaccaccgagcatcggctgtca
acaggtgggaatgagaaaatgcaactcacggcccttttgagcgctttcaaaggtgctgtc
gaattgtcagcaaggtcggcttga

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