KEGG   Coprinopsis cinerea (gray shag): CC1G_00908
Entry
CC1G_00908        CDS       T01275                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03020  RNA polymerase
cci03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CC1G_00908
  09124 Replication and repair
   03420 Nucleotide excision repair
    CC1G_00908
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cci03021]
    CC1G_00908
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_00908
Transcription machinery [BR:cci03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CC1G_00908
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CC1G_00908
SSDB
Motif
Pfam: RNA_pol_Rpb4 Pneumovirus_M2
Other DBs
NCBI-GeneID: 6007833
NCBI-ProteinID: XP_001831361
UniProt: A8N933
LinkDB
Position
7
AA seq 134 aa
MTTRLRQRATVDEEDAATLKLGPEFNNAGCLLISEVKYLLENREKDAPDTAVYNKTLDYV
KTFAKFNTTDSASAVRETLRREPALTQFETAQIANLCPASAEEAKSIIPSLVKIDDDRLQ
ALVDEIQTMRKFQT
NT seq 405 nt   +upstreamnt  +downstreamnt
atgaccactcgactgcgacagagggccactgttgacgaagaggacgctgcaaccctcaaa
cttggtccagagtttaacaatgccggttgcttgctgatttccgaagtcaagtatttgttg
gagaacagagagaaggatgcaccggatactgctgtctataacaagactctggactatgtg
aagacgttcgccaagttcaatactacggactcggcgagtgccgtacgagagactttgaga
agggagcccgcccttacgcagtttgagactgcacagattgccaacttgtgccctgcttct
gctgaggaagccaagagtatcattccaagtcttgtgaagatcgacgacgaccgcttacaa
gctctcgtggatgaaatccagacaatgcgcaagttccagacgtag

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