Coprinopsis cinerea: CC1G_01113
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Entry
CC1G_01113 CDS
T01275
Name
(RefSeq) replication factor-A protein 1
KO
K07466
replication factor A1
Organism
cci
Coprinopsis cinerea
Pathway
cci03030
DNA replication
cci03420
Nucleotide excision repair
cci03430
Mismatch repair
cci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CC1G_01113
03420 Nucleotide excision repair
CC1G_01113
03430 Mismatch repair
CC1G_01113
03440 Homologous recombination
CC1G_01113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cci03000
]
CC1G_01113
03032 DNA replication proteins [BR:
cci03032
]
CC1G_01113
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_01113
Transcription factors [BR:
cci03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CC1G_01113
DNA replication proteins [BR:
cci03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CC1G_01113
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CC1G_01113
MMR (mismatch excision repair)
CC1G_01113
DSBR (double strand breaks repair)
HR (homologous recombination)
CC1G_01113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF5521
POT1
Motif
Other DBs
NCBI-GeneID:
6009542
NCBI-ProteinID:
XP_001833051
UniProt:
A8NEJ9
LinkDB
All DBs
Position
2
AA seq
604 aa
AA seq
DB search
MSTTDVQLTAGSCERLQFANPQDASVFESPHTIQFLSIKKVNTANPNSNAPVDRYRIIIS
DGVHFIQAMLATQLNELVQNNSIGKHTVAVVERATCNYVQEKRLIVVLELRVVAHLPDKI
GDPQQLGPDSKRALDSASVTPAPQSVATSGPSTSTKTAPAKPATTGPQRGVYPIEGLSPY
QNNWTIKARVTQKSEMKQWSNAQGEGKLFNVTFMDDSGEIRATAFNLVADDLYPKLEEGK
VYYVSKARVGLAKKKFSNIPNDYELSLERNTEIEECHETTNLPTIKYNFVPLNGLDALAK
DAICDVIGVVKDVGEVGTITSRSNNRQISKRDLTLVDKSAYSVRMTLWGKQAEQFKVEPE
SIIAFKGVRVGDFNGRNLSMTSASTMQVNPDIEECFTLRGWYDSQGQTQTFQAQSSNNLG
GTSLGFRRDEARTLEDVKQAGFGQSDKPDYFSTRATIIHIKDDNIAYPACPTQGCNKKVI
EEADGWRCEKCEKVFEAPEYRYIMSMMVADHTGKAWFQGFNEVGVTVYGMSANDLVQIKN
NDHAQYKAIQYHAACNTYNFSCRAKEDEFNGVRRVRFGISRLAKVDYKEEAGYLRDLLYS
SWAR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgaccgacgtgcaactcaccgctggaagctgcgagcgtctccagtttgcgaac
ccacaagacgcgtctgtctttgaatccccgcacacaatccaattcctatcaattaagaag
gtcaacacggccaatcctaacagtaacgcccccgtggaccgatatcgaatcatcatctca
gacggtgtccatttcattcaagcgatgctcgcgactcagctcaacgagctagtccagaac
aacagcatcggaaaacacacagttgctgtggtggagagagccacctgcaactacgtccag
gagaaacgattgattgttgtgcttgaactccgcgtcgttgcccatctccctgacaagatt
ggagatcctcagcagcttggaccagatagcaaaagagcattggacagcgcatcggtcacc
ccagcgcctcaatccgtggcaacttctggcccgtcaacatctaccaagactgctcccgca
aagcctgccaccacaggccctcagcgcggtgtctaccccatcgagggtctcagcccttac
cagaacaactggactatcaaagctcgagtcacgcaaaagtcagaaatgaaacaatggtcc
aatgcacagggagagggcaagttattcaatgtgaccttcatggatgactcgggcgaaatc
cgggcaaccgcattcaaccttgttgccgatgatctttaccccaagttggaagaagggaag
gtttattacgtttccaaagctcgtgtggggttggcgaaaaagaagttttccaacattcca
aatgactacgaactcagtttggaaaggaacactgaaatcgaagagtgtcatgaaaccacc
aatttgcccacgatcaagtataattttgtccctctgaacgggcttgatgctctcgcaaag
gacgccatttgtgatgtcattggcgtcgtaaaggatgtcggagaagtgggtaccatcact
tcgaggtccaacaatcgacaaatctccaaacgggacttgacgctggtggacaagagtgcc
tattcagttcgcatgactctttggggcaagcaagctgagcaattcaaagttgaacccgag
tccattatcgcttttaaaggagttcgagttggtgatttcaatggccgcaacctatcaatg
acgagtgctagtactatgcaggttaatcccgatatcgaggagtgcttcactctaaggggt
tggtatgatagccagggccagacccagactttccaggcccaatcttcgaataaccttgga
ggcacctcccttggcttcaggcgggacgaagcacggactcttgaagacgtcaagcaggct
ggatttggtcagagcgataagcctgactacttttctacgagagccaccattatccacatc
aaggacgacaacattgcctaccctgcttgtcccactcaaggatgtaacaaaaaggttata
gaggaggccgatgggtggcgttgtgagaaatgcgagaaagtgttcgaggcgcccgagtat
cgctacattatgtccatgatggtcgcagaccatacaggcaaagcctggttccaaggattc
aacgaagttggtgtaactgtctacggaatgtccgcgaacgacctcgtccagattaagaat
aacgaccatgcacaatacaaggcaattcaataccatgctgcatgcaacacgtacaacttc
tcttgtcgagctaaagaagacgaattcaatggtgttcgccgggtcagatttggtatctct
cgtctggccaaggtcgattacaaggaagaagctggttatttgcgcgaccttttgtattcg
tcgtgggctcgctag
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integrated database retrieval system
