KEGG   Coprinopsis cinerea (gray shag): CC1G_01164
Entry
CC1G_01164        CDS       T01275                                 
Name
(RefSeq) pre-mRNA-splicing factor SLT11
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC1G_01164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cci03041]
    CC1G_01164
Spliceosome [BR:cci03041]
 Complex B
  Other components
   Prp19-related factors
    CC1G_01164
 Complex C
    CC1G_01164
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 Torus RRM_YTH1 zf_CCCH_4 zf-CCCH_2 zf-CCCH_10 zf-CCCH_4 zf-CCCH_3 zf-CCCH_PARP12 zf-CCCH zf-CCCH_12 RRM_occluded
Other DBs
NCBI-GeneID: 6009595
NCBI-ProteinID: XP_001833102
UniProt: A8NER1
LinkDB
Position
2
AA seq 330 aa
MPKADINKAGWEQSEFPILCETCLGSNPFIRMSKQEFGRSCGTCARPFTVFRWNPGEGAR
YKTTVICQTCAKVKNICQTCLLDLEFGLPTQVRDTALGVTNDAPTSDVNREYYAQNMEAK
LQDSGGNKSGLDITRTSIAGKEMLKQLARTDPYYKRNRPHICSFFVKGNCTRGSECPYRH
EIPAETSKVGAQQSIQDRYHGTNDPVAKKLLTTYAESMGLAAPADTSITSLFISSLPATA
TEDTVRTAVVQSVPSLDPQKIRSIVHVAKSRCAFANFRDRESAELAALAWAKGLEVDGQK
VNVKWGRSRPAKPPANEITPSGSSSVATAS
NT seq 993 nt   +upstreamnt  +downstreamnt
atgcccaaggcagacatcaacaaggcaggatgggaacaatcggaattccctatcctctgc
gaaacatgtttgggctcgaatcccttcattcgaatgtcaaaacaagaattcggacgctca
tgcggaacgtgtgcccgcccattcaccgtcttccgctggaaccctggtgaaggcgcccgc
tacaaaaccactgtcatctgccaaacctgcgcgaaagtgaagaacatttgccagacgtgc
ttgttggatttagaatttgggttgccgacccaggttagggatacggcgctgggggtaacg
aatgacgcacctaccagtgatgtgaatagggagtactatgctcagaatatggaggctaag
ctccaagattctggtggaaacaaatcgggcctggacattacccgcacctcaatcgcagga
aaagaaatgctgaagcaactcgctcgaacagacccttactataaacgcaaccgccctcac
atctgctccttcttcgtgaaaggaaattgcacaagggggagcgaatgcccctacagacac
gaaatcccagccgaaacttcaaaggtcggagctcagcagagcattcaagaccggtaccac
gggacgaacgatccagtggcaaagaagcttttgacaacgtatgctgaatcgatgggtctg
gctgctccagctgatacgtcaatcacttcgctgttcatttcctcattaccggcaacagca
acagaagatactgttcgaacagcggttgtgcaatctgtaccttccctcgatcctcaaaag
attcggtcaattgtacacgttgcaaagtctcgatgtgcgtttgcaaacttcagggatagg
gaaagcgcggagctggctgctctcgcctgggcgaaaggattggaggttgatggccaaaag
gtcaatgtcaagtggggccgaagcaggccagccaaaccgccggccaacgagattacaccc
tcaggatcatcgagtgtcgccactgcttcatga

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