Coprinopsis cinerea (gray shag): CC1G_01231
Help
Entry
CC1G_01231 CDS
T01275
Name
(RefSeq) WD-repeat-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CC1G_01231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cci03009
]
CC1G_01231
Ribosome biogenesis [BR:
cci03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CC1G_01231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR35_2nd
PROPPIN
B12-binding_2
Motif
Other DBs
NCBI-GeneID:
6009663
NCBI-ProteinID:
XP_001833169
UniProt:
A8NEZ2
LinkDB
All DBs
Position
2
AA seq
926 aa
AA seq
DB search
MPAAMSIADSDVSTPPPRKRLRKDSTAALGGINKEPRLFVPFRALGLITNHVPFVLQTRS
FKGASEGPRIHILTCLGRSWALWEGGKMSLLFTGPDAPELISGMAMDGNDVWVTSGPYLI
KYLRGKEKLRIENPLGTPLAYITVLGSQILALTEDGSRMLIWETSTASTSGRDYRIREGL
YCNLDSSPSNLPQQGFGFQQSRRYGALEHPVSDAHLQIRFLRTPFHTHHTSPAIDVVGLG
FASGEISVFDVRAVERLMRMYMEGGSVRALSFRSDGQPILASASSAGHIALWDLNAGGRL
LHLVRGAHDGAVSSLEWVPGQPLLISSGEDNSVKQWLFDSPTSPPRLLKFRSGHHAPPHL
IRYYGDDGKQLLTASRDRSSLAKKATSLSIPLASLKFPPVTSMSYSSARAKDWDDILTGH
TDETFARTWTMQSKRLGKHTFGFAEDTKGKGKPRATLGSVKSTCVTACGNFGIAASSTGQ
IHMWNMQSGIRRRTFQLGPCPPEVANRIHGTNSEKQKERAVTGLATDPLNTTLVACTMDG
TVNFFDFKSANLEHTVVLPSTAVSLTLQRDSGLLAVVCDDMVVRIIDIETRKIVRELGGF
RGRILDITFSPDSRWLVATSLDSIIRTFDIPTGRLIDAFKTSSVATTLSFSPTNDFLATA
HVDSLGVYLWANRAQYTEVAFHGIVEDEVAEVSLPSVQGTSEEEALNALAELTVQDKDVD
VFSTPDQLDGELITLTLLPRSRWQTLLNLEVIQQRNKPKEPPKAPEKAPFFLPTLPGVEP
RFAVEKKEAEPKKSQRLVKAALDASTVFYQKLQEQAEDSDYEEFFNYAKTLSPAALDLEI
RQLVTIESLAQFMHALAQRLRSHRDFEAVETFMNVFLRMHGEVLIANEELQKPMETLKEV
HQSESKRVLELIASSLGTLGFVRDAL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagcaatgagcatcgccgactctgatgtttcgaccccgcctccaagaaaacga
ctacggaaggactcgacagcggccctgggtggaataaacaaggagccgagactgttcgtg
cccttcagagcactaggcctaatcaccaatcatgttcctttcgtccttcaaacccgatct
ttcaagggcgcttcagaagggccgcggatacacatccttacttgcttgggaaggtcatgg
gcattgtgggagggaggaaaaatgtcgttgcttttcacgggtcctgatgcgcctgaactg
atctcgggcatggcaatggacggaaacgatgtctgggtcacctctggcccttatcttatc
aagtatttaagagggaaagagaaactccgtattgaaaatcctcttggaacacctctcgcc
tacatcaccgtccttgggtcgcaaatcctcgctctaacagaagacggctctcgaatgctc
atctgggaaacctccactgcaagcacttctggccgcgactatcgaattcgagaagggctt
tactgcaacctcgattcttcacccagcaacttacctcaacaaggttttggtttccagcaa
tcaaggagatatggagctctggaacatccagtctcggacgcgcatctacaaattcgcttc
ctcagaactcctttccacacccaccacacctctccggctatcgatgtggtgggactcggt
tttgcctccggggagatatccgtattcgacgttcgcgccgttgagcggctaatgagaatg
tatatggaaggagggagtgtccgggctctaagctttagaagtgatggacagccaatcctt
gcatctgcttcttcagctggccacattgctctctgggacctcaacgctggaggacgcctc
cttcacctggttcgcggcgcacatgatggtgccgtgtcctcgctagaatgggtaccagga
caacctctccttatatcctctggagaagacaatagtgtgaaacaatggctgttcgattct
ccaacctcccctcctcgactgctcaaattccgctctggacaccatgcaccaccgcatctg
atcagatactacggcgacgacggaaaacaacttttgaccgcatcaagagatagaagctcg
ttagcaaagaaggctacttcgctttctatccctctcgcttctctcaaattcccaccagtc
acgtcaatgtcatactcttccgcgagggctaaggactgggacgatatcttaacgggtcat
acagacgaaaccttcgctcggacatggaccatgcaatcgaaacgacttgggaaacatacg
tttggttttgcggaggataccaaaggcaagggtaaaccgcgagcaacattgggctctgtc
aagagcacatgtgtcacggcatgcggcaattttggcattgctgcctcctcgacaggccaa
atccatatgtggaatatgcagtcagggattcgaaggagaacattccaattgggaccctgt
cccccggaagttgccaaccggatccatggtactaactctgagaagcagaaggagagggca
gtcaccgggttggcgaccgatccgttgaataccaccttggtggcatgcaccatggatggc
actgtcaacttcttcgacttcaaatccgcaaaccttgaacacactgtggtgctgccctcc
accgcagtctccctgaccttgcaacgtgacagcggcctactcgctgtggtgtgcgacgat
atggtcgtgcggattatcgacattgagaccagaaagatcgttcgtgaactgggtggtttc
agaggtcgaattcttgacatcacattctctccggactctcgatggcttgtagccacatcc
ttggattccattatccgaaccttcgatataccaacaggccgattgatagacgccttcaag
acatcgagtgtagccacgacactctctttctctcctaccaacgacttcctagcaacagct
cacgtcgatagcttgggtgtctatctatgggcaaaccgcgcacagtacaccgaagtagcc
ttccatggtattgtggaggacgaggtggccgaagtttcgctgccatccgtacagggaaca
tcggaggaggaagctttgaatgcattggcagaactcactgtccaagacaaagacgtcgac
gttttctcaacaccggatcaattggacggggagctcatcacactgacattgctccctcga
tcccgatggcaaaccctgcttaacctcgaagtgatacagcagcgcaacaagccaaaggaa
cctcccaaggctccggagaaggcgccatttttcctaccgacgttgcccggagttgaaccg
cgcttcgctgttgagaagaaggaagcagaacccaagaagtcacagcgactagtgaaggct
gctcttgacgcctccactgtgttttaccaaaagctccaggagcaagctgaagacagcgat
tacgaagagttcttcaactacgccaaaacactatcccctgctgctctcgatctggagatc
cgccagttggtgacgatcgaaagtctcgcgcagttcatgcatgctttggcccagagactg
agaagtcatagggactttgaagctgtggagacattcatgaatgtcttccttcgcatgcac
ggagaagttttgattgccaacgaggaactccagaaaccgatggagacgctgaaggaggtt
catcagagcgaaagcaagagggtgttggagttgattgcctcgtcattgggtacattgggt
ttcgttcgggatgctttgtag
DBGET
integrated database retrieval system