KEGG   Coprinopsis cinerea (gray shag): CC1G_01803
Entry
CC1G_01803        CDS       T01275                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03030  DNA replication
cci03410  Base excision repair
cci03420  Nucleotide excision repair
cci03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CC1G_01803
   03410 Base excision repair
    CC1G_01803
   03420 Nucleotide excision repair
    CC1G_01803
   03430 Mismatch repair
    CC1G_01803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cci03032]
    CC1G_01803
   03036 Chromosome and associated proteins [BR:cci03036]
    CC1G_01803
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_01803
DNA replication proteins [BR:cci03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CC1G_01803
  DNA Replication Termination Factors
   ELG1-RFC complex
    CC1G_01803
Chromosome and associated proteins [BR:cci03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CC1G_01803
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CC1G_01803
  Check point factors
   HRAD17(Rad24)-RFC complex
    CC1G_01803
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 nSTAND3 RuvB_N RCF1-5-like_lid AAA_3 Viral_helicase1 Mg_chelatase MeaB AAA_assoc_2 Gp44_lid NTPase_1 AAA_24 DNAX_ATPase_lid AAA_19 Rad17 NPHP3_N RNA_helicase AAA_11 ABC_tran AAA_5
Other DBs
NCBI-GeneID: 6005549
NCBI-ProteinID: XP_001829123
UniProt: A8N2F0
LinkDB
Position
1
AA seq 323 aa
MPFRVEKYRPQVLDDIVGNTDTIERLKVIARDGNCPHLIISGMPGIGKTTSIHCLAHQLL
GDAYKEGVLELNASDERGIDVVRNKIKAFAQKKVTLPPGRHKIIILDEADSMTPGAQQAL
RRTMEIFSNTTRFCLACNMSNKIIEPIQSRCAILRYAKLRDQEVLKRLLEICEMEKVQYN
DDGLTALIFTAEGDMRQAINNLQSTHSGFGFVSADNVFKVCDQPHPIVVQSMIRACLKGE
IDPALEKLHELWDQGYSAVDIVVTLFRVVKTFDDMPEYTKLEYIKEIGFTHMRILEGVGT
LIQLAGLVARLCKMQMKPELLKI
NT seq 972 nt   +upstreamnt  +downstreamnt
atgccattcagggtagaaaaataccgtccacaggtgctggacgatattgtcggcaacact
gataccattgaacggctaaaggtcattgcacgggatggcaattgccctcacttgattatc
tcgggaatgccaggaattggcaaaacgactagcattcattgcttggcccatcaattactc
ggagatgcttacaaggaaggcgtcctcgaactcaacgcatcagacgaacgcggcattgac
gtcgtgcggaacaaaatcaaagcttttgctcaaaagaaggttactttgccaccaggccga
cacaagatcatcatcctcgatgaagccgacagtatgacacctggcgctcagcaagctctc
cgaaggaccatggaaatcttctcaaacaccactcgtttctgcttggcctgtaacatgagc
aacaagataatcgaacccatccagtcgcgctgtgcgatccttcgatatgccaaactgcgg
gaccaggaagtcctgaagcggttattggagatttgcgaaatggaaaaggtgcaatacaat
gatgatggactgaccgctttgatctttacggcggaaggcgatatgcggcaagcaattaac
aaccttcagtcaacgcattcagggtttggcttcgtctcggccgacaatgtgttcaaagtc
tgcgaccagccacaccctattgttgtgcaatccatgattcgagcttgtctaaaaggagag
atcgaccctgcactcgaaaaactacacgaactgtgggatcaggggtacagtgctgtggac
attgtcgttactcttttcagagtggtcaagacctttgacgacatgcccgagtatacgaaa
ctggagtatatcaaggaaattgggtttacgcacatgcggatactggaaggcgtagggaca
ctgatacagcttgcagggcttgtggctcgattgtgcaagatgcaaatgaagccagagctt
ctaaagatatag

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