Coprinopsis cinerea (gray shag): CC1G_01891
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Entry
CC1G_01891 CDS
T01275
Name
(RefSeq) DNA-directed RNA polymerase II polypeptide
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03020
RNA polymerase
cci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CC1G_01891
09124 Replication and repair
03420 Nucleotide excision repair
CC1G_01891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cci03021
]
CC1G_01891
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_01891
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CC1G_01891
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CC1G_01891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
6006694
NCBI-ProteinID:
XP_001830255
UniProt:
A8N5W0
LinkDB
All DBs
Position
3
AA seq
360 aa
AA seq
DB search
MNSTDSEPIVRVREVKKDKVNFVLENVDLARVVMADIPTVAIDLVEFEANTSVLPDEYIA
HRLGQIPLISTNCDEAIRYTRDCTCLSQCSYCAVQLRLDVACNDDTTMEVTSNHLEVVPL
DDYMQEEIQHGEEKAKRTQWFGHPVGKNEPGTPPVLICKIRKGQELRVKCIAKKGIAKEH
AKWSPCSAVSFEYDPYNKLRHTSYWYESDIQAEWPLSENAQEEEPPRDDEPFDFNAKPNK
FYLEIETDGSLAPQDVVEKGLNELQAKLANLILGLKEPTDEDMGGGGAGGPMPAWGAPAA
APAESTWGTAGSSWPGGSSPGRGGATSAYSSSPGTGGSGWGGGAASGWGSPERQVGSWTA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgactgattcagagcccattgtccgcgtacgtgaagtcaagaaggacaaggtc
aactttgtcctcgaaaatgtagaccttgcgcgcgtcgtcatggccgacattccaactgtt
gccatcgatcttgtcgagtttgaggcaaacacctctgtgctacccgacgaatacattgcc
caccgactcggtcagatccctctaataagcacaaactgcgacgaagccattcgatacact
cgagactgcacatgtctctcacaatgctcctactgcgctgtccaactccgcctcgacgtc
gcctgcaacgatgacaccaccatggaagtcacgagcaaccacctcgaggttgttcccctc
gacgactacatgcaagaggaaatccaacacggagaggaaaaagcaaagcgaacccagtgg
ttcggtcatccagtgggcaaaaacgaacctggcactcccccagtcctgatatgcaagatc
cgcaaaggccaggaactcagagtgaaatgtatcgctaaaaagggcattgccaaagagcac
gccaaatggtctccctgctcggccgtctccttcgaatacgacccctacaacaaactccgc
cacacatcttactggtacgaaagcgacatccaagccgaatggcccctctccgaaaacgcc
caagaggaggaaccaccacgggacgatgagccattcgacttcaacgcgaaacctaacaag
ttttatctcgaaattgagacggatgggagtttggcaccgcaggatgtagtggagaaggga
ttgaatgagctacaagccaagttggcaaatttgattttgggtttgaaggagccgaccgac
gaggatatgggcgggggtggtgcaggcgggccaatgcctgcttggggagcacctgctgct
gcacccgctgagtcaacttggggaaccgctggatcctcatggcccggaggaagcagtcca
ggtaggggaggcgcaacgagtgcatatagttcgagtccgggcactggtggatctggatgg
ggcggaggtgcggcttcaggctggggaagcccagaacgacaagttggctcttggactgct
tga
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