KEGG   Coprinopsis cinerea (gray shag): CC1G_02450
Entry
CC1G_02450        CDS       T01275                                 
Name
(RefSeq) hypothetical protein
  KO
K10740  replication factor A3
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03030  DNA replication
cci03420  Nucleotide excision repair
cci03430  Mismatch repair
cci03440  Homologous recombination
cci03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CC1G_02450
   03420 Nucleotide excision repair
    CC1G_02450
   03430 Mismatch repair
    CC1G_02450
   03440 Homologous recombination
    CC1G_02450
   03460 Fanconi anemia pathway
    CC1G_02450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cci03032]
    CC1G_02450
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_02450
DNA replication proteins [BR:cci03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    CC1G_02450
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     CC1G_02450
   MMR (mismatch excision repair)
     CC1G_02450
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     CC1G_02450
SSDB
Motif
Pfam: Rep_fac-A_3 Ig_NUP210_15th
Other DBs
NCBI-GeneID: 6008672
NCBI-ProteinID: XP_001832188
UniProt: A8NBJ0
LinkDB
Position
9
AA seq 115 aa
MSNGIEQEVTPRVNSALLSNFQGRTIRLACKLVKFNDNGSLTVSAADGGQVVVQLVGEHE
PISDTYLEIVGKVMDPTTIQMRGCIGLGADLDMKLVNDTINLIHDERFYGRMFSY
NT seq 348 nt   +upstreamnt  +downstreamnt
atgtccaacggaattgagcaagaagtgacgccccgagtcaactcggcgctcttgtccaac
tttcaagggaggactattcgattagcttgtaaattggtcaagttcaacgataatggcagt
ttgaccgtgtcagcggcggatggcggacaagtcgtcgtgcagctcgttggggaacacgaa
cccatctccgacacttacctcgaaatcgtcggtaaagtgatggatcctacgacgatccag
atgcggggttgcatcgggttgggagctgatcttgatatgaagcttgtgaacgatacgatc
aacctcattcatgatgaacggttttatgggaggatgttttcgtactga

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