Coprinopsis cinerea (gray shag): CC1G_02454
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Entry
CC1G_02454 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03013
Nucleocytoplasmic transport
cci03015
mRNA surveillance pathway
cci03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC1G_02454
09122 Translation
03013 Nucleocytoplasmic transport
CC1G_02454
03015 mRNA surveillance pathway
CC1G_02454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_02454
03041 Spliceosome [BR:
cci03041
]
CC1G_02454
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CC1G_02454
TREX complex
CC1G_02454
Spliceosome [BR:
cci03041
]
Complex C
Other components
EJC/TREX
CC1G_02454
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CC1G_02454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
TRL
Tub
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
6008676
NCBI-ProteinID:
XP_001832192
UniProt:
A8NBJ4
LinkDB
All DBs
Position
9
AA seq
247 aa
AA seq
DB search
MNGPDRRHNIYHRTKRQLVGHQVPPAWRPNVMQAAKRAAEDAGSRILISKLPIDVNEQEV
EELFKKTVGPVRESFLVYNSQGKSKGMAMVWFVRSGDAAIARAKYDGKIVDGRRPIKIEI
IVDGVPGSASTSQVGPAAPAAPPSLLDRMGIKPTAAGPKATSLVQRTNPPGHPLPNQPLV
TKLQAQAAARIASGAPPPTAPRAVPPRRPRIRKGPKRLQKKAVTVEDLDKEMEDYRAAIP
ENGFAMT
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaccagatcgaagacacaacatctaccaccgcacaaaacgacagctcgtcggg
caccaagtacctccagcatggcgtccaaacgtgatgcaagcagcaaaacgcgcggcagag
gacgcgggcagcaggattctcatcagcaagctgcccatcgacgtgaatgagcaggaagtg
gaggaactattcaagaagacagttggccctgtcagggagtcgtttctggtgtacaactcg
caaggaaagtcgaaggggatggcgatggtgtggtttgtgaggtcgggggatgcagctatt
gcgagggccaagtatgacggcaaaattgtagatggacgacggcccatcaagattgaaatc
attgtggacggtgttcctggctctgcatcgacatcacaggttggaccagcagcaccggca
gcacctccgtctctgcttgaccgtatgggtatcaaaccaacagctgctggacccaaggca
acgtctcttgtccagcgaaccaacccaccaggccacccattacccaatcaacctcttgta
actaaattgcaagcacaagctgccgctcggattgcttcaggtgcacctccaccaacagcg
cctcgtgccgtcccgccacgtcgacctcgaataaggaaaggacccaagcggctgcagaag
aaagcagtcacagtcgaagacctcgacaaagagatggaagattaccgcgcggcaatccca
gaaaatggattcgccatgacatag
DBGET
integrated database retrieval system