KEGG   Coprinopsis cinerea (gray shag): CC1G_02454
Entry
CC1G_02454        CDS       T01275                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03013  Nucleocytoplasmic transport
cci03015  mRNA surveillance pathway
cci03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC1G_02454
  09122 Translation
   03013 Nucleocytoplasmic transport
    CC1G_02454
   03015 mRNA surveillance pathway
    CC1G_02454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cci03019]
    CC1G_02454
   03041 Spliceosome [BR:cci03041]
    CC1G_02454
Messenger RNA biogenesis [BR:cci03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CC1G_02454
    TREX complex
     CC1G_02454
Spliceosome [BR:cci03041]
 Complex C
  Other components
   EJC/TREX
    CC1G_02454
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CC1G_02454
SSDB
Motif
Pfam: RRM_1 FoP_duplication TRL Tub RRM_occluded
Other DBs
NCBI-GeneID: 6008676
NCBI-ProteinID: XP_001832192
UniProt: A8NBJ4
LinkDB
Position
9
AA seq 247 aa
MNGPDRRHNIYHRTKRQLVGHQVPPAWRPNVMQAAKRAAEDAGSRILISKLPIDVNEQEV
EELFKKTVGPVRESFLVYNSQGKSKGMAMVWFVRSGDAAIARAKYDGKIVDGRRPIKIEI
IVDGVPGSASTSQVGPAAPAAPPSLLDRMGIKPTAAGPKATSLVQRTNPPGHPLPNQPLV
TKLQAQAAARIASGAPPPTAPRAVPPRRPRIRKGPKRLQKKAVTVEDLDKEMEDYRAAIP
ENGFAMT
NT seq 744 nt   +upstreamnt  +downstreamnt
atgaatggaccagatcgaagacacaacatctaccaccgcacaaaacgacagctcgtcggg
caccaagtacctccagcatggcgtccaaacgtgatgcaagcagcaaaacgcgcggcagag
gacgcgggcagcaggattctcatcagcaagctgcccatcgacgtgaatgagcaggaagtg
gaggaactattcaagaagacagttggccctgtcagggagtcgtttctggtgtacaactcg
caaggaaagtcgaaggggatggcgatggtgtggtttgtgaggtcgggggatgcagctatt
gcgagggccaagtatgacggcaaaattgtagatggacgacggcccatcaagattgaaatc
attgtggacggtgttcctggctctgcatcgacatcacaggttggaccagcagcaccggca
gcacctccgtctctgcttgaccgtatgggtatcaaaccaacagctgctggacccaaggca
acgtctcttgtccagcgaaccaacccaccaggccacccattacccaatcaacctcttgta
actaaattgcaagcacaagctgccgctcggattgcttcaggtgcacctccaccaacagcg
cctcgtgccgtcccgccacgtcgacctcgaataaggaaaggacccaagcggctgcagaag
aaagcagtcacagtcgaagacctcgacaaagagatggaagattaccgcgcggcaatccca
gaaaatggattcgccatgacatag

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