Coprinopsis cinerea: CC1G_02631
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Entry
CC1G_02631 CDS
T01275
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cci
Coprinopsis cinerea
Pathway
cci03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC1G_02631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cci03041
]
CC1G_02631
03009 Ribosome biogenesis [BR:
cci03009
]
CC1G_02631
Enzymes [BR:
cci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CC1G_02631
Spliceosome [BR:
cci03041
]
Complex A
U2 snRNP components
U2 related factors
CC1G_02631
Complex B
CC1G_02631
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
CC1G_02631
Ribosome biogenesis [BR:
cci03009
]
Eukaryotic type
90S particles
Helicases
CC1G_02631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
AAA_22
SRP54
AAA_19
nSTAND3
T2SSE
ABC_tran
Flavi_DEAD
AAA_7
PhoH
ATPase
AAA_30
Motif
Other DBs
NCBI-GeneID:
6016800
NCBI-ProteinID:
XP_001840168
UniProt:
A8PBF1
LinkDB
All DBs
Position
4
AA seq
760 aa
AA seq
DB search
MTEKSSKSSSSKLSANELDIIKTKEPLFGLMSRKVTGDRVRLALESDVNSFTKRPHTPQY
KKILEARKKLPVYAQMDEFLTMFNENQIIVMVGETGSGKTTQIPQFVAFSDLPHTKGKMV
ACTQPRRVAAMSVAKRVADEMDVELGRHVGYSIRFEDMTEPGTTFLKYMTDGMLLREAMN
DPELTRYSTIILDEAHERTLATDILMGLLKNVAKKRADLKIIVMSATLDALKFQKYFSIR
SNTQAPLFKVPGRTHPVEVFYTQEPEPDYVEAAIRTVLMIHRAEEPGDILLFLTGEEEIE
DACRKIKLEADDLLNQDPDSVGPLVCIPLYSSLPPQQQQRIFDPPPLSQSGGPPGRKVVV
STNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPG
KCFRLYTEKDFMKELEEQTYPEILRSNLANTVLELVKLGIKDLVRFDYVDAPAPETLMRA
LELLNYLAALDDDGNLTALGSMMADFPLDPQLAKMLIVSPEFRCSNEILTITAMMSVPNV
WLRPANQRREADAAKARLTVPDGDHLTLLNVYNEYKNNQYDKNWAWNNYLNSRALAQADN
VRSQLERTMERFEIASVSLADTKKLYVAIRQALVNGFFMQVAHREGEKGNYLTVKDNQVV
ALHPSCGLEGQPEWVLFNEFVLTTRPYIRTVTEVKPEWLLEYAPIYYDLKTWPDSETKRA
LQRAANKKYGTTYSNASGKRSGSSSKSGTPDARETKKARK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaaatcttcaaaatcgtcgagcagcaagctcagcgccaacgaactggacatc
atcaagaccaaggaaccgctgtttggtttgatgtccaggaaagtcactggcgaccgtgtt
aggctggccctggagagcgatgtgaactcgttcaccaagagaccgcataccccacaatac
aaaaagattctcgaggcgcgtaaaaagctgcctgtttatgcccaaatggatgaattcttg
acgatgtttaatgaaaaccaaatcattgttatggttggcgagacgggctcaggaaaaaca
acacagatcccgcaatttgtagcattttcagaccttccccacacaaaaggcaaaatggtg
gcctgcacgcaacctcgacgagttgctgccatgtccgttgcaaaacgtgtagcagacgag
atggacgttgagctcggtcgccatgtcggttactcgattcgattcgaggacatgactgaa
cccggtaccacattcctcaaatacatgaccgatggtatgcttctgcgtgaagccatgaac
gacccggagttgacccggtacagcaccatcatcctcgacgaagcccacgaacgtacactc
gcaacggatatcttgatgggtctcctcaaaaacgtggccaagaagcgcgcagacctcaaa
atcattgtcatgtctgccaccctcgacgccctcaaattccaaaagtacttcagcatccgc
tcgaacacccaggcgccgctcttcaaggtccctggtcgtacccatcctgtcgaggtcttt
tatacgcaagagccggaaccagactacgtcgaggccgctatccgcacggtgttgatgatc
cacagagctgaggaacccggtgatatcctcctcttccttaccggtgaggaggagatcgag
gatgcctgtaggaagatcaagctggaggcagacgacctgctgaatcaagaccctgactct
gtcggccccctcgtctgcattccgctgtattcgtcccttcctcctcaacagcagcagcgg
atcttcgacccaccgccactatcacagtctggaggtcctccaggtcggaaggtggtcgtt
tccaccaatatcgccgaaaccagtttaacgatcgacggaatcgtctacgtcgtcgacccc
ggtttctcgaagcagaaggtgtacaaccccaggatccgtgtggagagtttgctcgtctcg
cctatttccaaggcgagcgctcagcagcgtgctggtcgtgctggtcgaacgagacccgga
aagtgcttccgtctctataccgagaaggacttcatgaaggagctggaggagcagacgtac
cctgagatccttcgaagcaaccttgccaacaccgttctcgagctggttaagctgggtatc
aaggatctcgttcggttcgactacgttgatgcacccgcccctgaaacgctcatgcgagca
ctcgagctgctcaattacctcgcggctcttgacgacgatggcaacctgactgccctcgga
agcatgatggccgatttccctctggatcctcagttggccaaaatgcttatcgtcagcccg
gagttccgatgcagcaatgaaatactcaccatcaccgccatgatgtcagtccccaacgtg
tggctacgacccgctaaccagcgtcgggaagctgatgccgcgaaggccaggctcacggtt
cctgatggagaccaccttactcttctgaatgtttacaatgagtacaagaacaatcagtat
gataagaattgggcctggaacaactacctcaactctcgagctctggctcaagctgacaac
gttcgaagtcagttagagcggacgatggagcggttcgagattgctagtgtctcgctagcc
gacacgaagaaactctatgttgctatccgacaggcgctggtcaacggtttcttcatgcag
gtggcccatcgtgagggcgagaagggcaactacctcaccgtcaaagacaatcaggttgtc
gcccttcatccttcttgtggattggaaggacagccggaatgggtgctgtttaatgagttc
gtgctaacgactcggccgtacatccggacggtgactgaggttaagccagaatggctcctc
gagtatgcacccatctactacgatttgaagacgtggccggattccgagacgaagcgagct
ctgcagcgcgctgcgaacaagaagtacggcacgacatattccaacgcgagcggcaagcgc
agtgggagcagcagtaaatctggcaccccagatgcccgtgagaccaaaaaggcgaggaag
tag
DBGET
integrated database retrieval system
