KEGG   Coprinopsis cinerea (gray shag): CC1G_02679
Entry
CC1G_02679        CDS       T01275                                 
Name
(RefSeq) hypothetical protein
  KO
K10881  26 proteasome complex subunit DSS1
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03050  Proteasome
cci03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    CC1G_02679
  09124 Replication and repair
   03440 Homologous recombination
    CC1G_02679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cci03019]
    CC1G_02679
   04131 Membrane trafficking [BR:cci04131]
    CC1G_02679
   03051 Proteasome [BR:cci03051]
    CC1G_02679
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_02679
Messenger RNA biogenesis [BR:cci03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     CC1G_02679
Membrane trafficking [BR:cci04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    CC1G_02679
Proteasome [BR:cci03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     CC1G_02679
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     CC1G_02679
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 6016848
NCBI-ProteinID: XP_001840216
UniProt: A8PBM0
LinkDB
Position
4
AA seq 104 aa
MSASASTSKDAAGKAEVAKPAETQPSLGVLEEDDEFEEFPVADWDDAETDLAHLGGAAPG
AAKSGGDKLWEDNWDDDDIEEEFSVQLRAELTKTKSSNSDAMEQ
NT seq 315 nt   +upstreamnt  +downstreamnt
atgtcagcttcagcttcgacttccaaagacgccgctggtaaagctgaggttgcgaagccc
gctgagacccaaccttcgcttggggtgttggaggaggatgatgagtttgaggagtttcct
gttgctgattgggacgacgcagaaaccgacctcgcgcacctcggaggcgcagcacccggc
gctgccaaatcgggcggcgacaagctttgggaggataactgggatgatgatgatattgag
gaggagtttagtgtgcagttgagggcagaattgacgaaaaccaaatcctcaaacagtgac
gctatggagcagtga

DBGET integrated database retrieval system