Coprinopsis cinerea (gray shag): CC1G_02924 Help Entry CC1G_02924        CDS       T01275                                  Name (RefSeq) helicase sen1   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism cci  Coprinopsis cinerea (gray shag) Brite KEGG Orthology (KO) [BR:cci00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cci03021]     CC1G_02924 Enzymes [BR:cci01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      CC1G_02924     5.6.2.5  RNA 5'-3' helicase      CC1G_02924 Transcription machinery [BR:cci03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      CC1G_02924 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 AAA_30 UvrD-helicase Viral_helicase1 nSTAND3 DEAD AAA_16 AAA_22 AAA ResIII AAA_25 Motif Other DBs NCBI-GeneID:  6012371 NCBI-ProteinID:  XP_001835836 UniProt:  A8NRR5 LinkDB All DBs Position 8 AA seq 1960 aa AA seqDB search MSTKNRGKSIDALLENLRDNPADNASASDDVLGRVYDYLIKDVSAKPGDLHWFCDKASRT TVAAASFLLRLFGFDGPLVEEWKKHFHRCLSSCAFCVESLECIKISARSTYFGAYTKEIL DTFFQKFEAWELTRVLADLETRGFSTAPISRNQGRTLAEVPPPLLYRILANWTVFTDSNV QAILHAFVPDSAVPDWPSNHCPPGLIISMSDDSQKLREWACRQLPSLELAIMSLEKFTPS YVKAFRALTAAIQSQSNPASPISTVQLSSDPIILWSAFSTVLRLVPADWILSNRNQNLDL RHLVTSHLHDTGPHLINVLKSLFFLFKRLGKNFWTGEAHDFPQVCFDSMKDNQAFLELFH GKDRARILPGISEFLYTLHGTGAYGEVLAKAVDLLCRELQHERFADARPPIMAAGVRLLT SVIERSGKDKEARYDDDLRNTLDIHGLALVGVAYGRSHTSNDWAETRKSARHLFNLIFGR DSTRILSTVDRVCDIMNGVLPQSEGPSIPAPAICSSLWKEVHSAIQARDDTAIANVVLAS AQTSHLSVLTKTSYHKIERVEAHGQGTIAGAEAIDSINAALAGTRSGFLDAISRFTNSSL STTAMNLLAKPEVGRAVISLLLSPMPDCQTAAQSIIGLAFDVDVRMDCFRAMFSNLPIIT FEGLTDFLTTFQEHANKVPEACTLSTSLVRCFNDVLEVLCSSPDGLLLSKTFLRPGDPQG PASRLLSFWKLLTTCITTIFKHTPVWSSFYKAKEMTVWMRDALILGRDIVGQWRLVESAI NSDSAKPSKGLSHAGKEIVACFKAMLPQFFKWLRLTDEELLYQSLAIIRKLLQVLQETDE KPDNTTLERLQRFVASARNDKEQKKSRLDPASLMELGEALYQFDAHSDGDDDGDEIEIIS HVKPPKKEKVDKRAVKPVVKEEKKVEVPAHVQQQRLLNKQLSSSKGKQSTFDSRQKQLNF KSLKDDEAKIKAASKLPKFKKIAQPTASTSKPGPKPEAASSTKTSNPPQSSEAEESSDDD DPGAALAALTAGPQLPKSPKIRKEQRRTIQMMDASTAPNPKAERIEQAKKDRQKALRLRP DISNLHKIILSWDYKHSGPYPPSGNWDPDILQQVPEEFRDYAQYHRIFEPLLLLECWAQI LGTKKEVPPSYLFTVASKQYVSDWIDMDFSATDPIPNDWDLSDVDIVLLESPDGEKTVMG KAVTFRKGQMGAVATIRCYGQLTDPGMTISTPWKISKLYSLSTINREYGALLSLPHIESQ RDQIFHAKAARMPDIDPAEVEKAMSTYKINEPQATAIIGAMASTGFVLIQGPPGTGKTST ICALVARFMSRRAIPITAPGSKEVPAKPKILICAPSNAAIDEIAQRLKAKYCDGDPVKKL SIVRMGAQGSIGSAVKGVSLDSLVQDKIQEETGNQGFPTEELNRQISMLKMEMESLKHAR DEKLKEMTNLQNNYARHNALDQETQAMGRKRQALAAELNKLRDKLKSDGRSMEALRRKAR FEIIRDADVICSTLSGSGHEALLDQTFEMVIIDEAAQAVELSSLIPLKYESKRCIMVGDP QQLPPTVISQQAASKKYDQSLFQRFFKKSPKAVHLLSIQYRMHPEISRFPSKAFYNDRIQ DGPNMKELTARPWHAEPLLGIYKIFNVNGNAEEGPQNSLKNRAEVEVATALYRRLSTQFR EFGLERKIGIVSPYRAQIKELERSFFQAFGQSVLDEIDFNTVDGFQGQEKDIIILSCVRG GPGVKSIGFMADVRRLNVAITRAKSALFILGNVPTLERSESIWKQAIADARERNLIVNVD SKTFTQPSAMTSVPVMKALKTPSRKKPRLSGPDNLPSQSQNLPAGLATPKALKNSMKKGF NPPPTAASLPNKPAQPVASASGSSSSPRPKLKRPAEDDGPNGLPPKPRNGPGPGNGPRPP PPKRAKTGMSMFIPKKKKKVSHRSSFATSVSLTPRPVAMI NT seq 5883 nt NT seq  +upstreamnt  +downstreamnt atgagcaccaagaacagaggcaaatccattgatgccctactcgaaaatctgcgcgacaat cctgccgacaatgcttcagccagcgacgacgtcctcggacgggtttacgactacttgatc aaggacgtttcagccaaacctggagacctacactggttttgcgacaaggcatcacgtacc accgttgctgcagcgagcttcttgcttcgcctttttggtttcgacggcccgttggtggag gaatggaagaagcattttcacagatgtctttcgagttgcgcgttttgcgtcgaaagcctc gagtgtataaagatttcggcacggtccacatattttggtgcatataccaaggagatattg gacacattctttcaaaagtttgaagcttgggagttgacgagggtgctggcagacctggaa acacgaggattttcgactgcgccaatatcccggaaccaaggccgcacattggcagaggtg cctcctcccctactctaccggatcctggcgaattggacagtctttacggactccaatgtt caagcaatcctgcacgccttcgtacccgacagtgccgtacccgattggccgtcaaatcat tgccctcctggtctaatcatatcgatgtccgacgattcacagaagcttcgtgaatgggct tgccgtcaactcccatcactggagcttgcgataatgtcattggagaagtttaccccttcc tacgtcaaggcgtttcgagcccttaccgcagctatccagtctcagtcaaatccagcctct ccaatctcaacggtgcagctttcttcagatcctatcatcctttggtccgcgttcagcacc gtcttgcgacttgttccagccgattggattttgtcgaatcgcaaccagaacctagattta agacatctcgtaacaagccatttgcatgacactggaccccatctcattaatgttctcaag tccctattcttcctgttcaaacgcctagggaagaatttctggacgggcgaagcgcacgac ttcccccaagtttgttttgattccatgaaggacaaccaggcttttctggagctgtttcac gggaaggatagagctcggatcctccctggcatctcagagttcctttatacccttcatggt acaggtgcatatggagaggtcctcgccaaagccgtcgatcttctctgtcgagaacttcag catgaacggttcgctgacgcgcggcctcctatcatggcagcgggagtccgattgctaact tctgtcattgagaggagtggaaaggataaagaagcccgctacgacgacgacctcaggaac acgctcgacattcatggcttggcactggttggcgttgcctacggtcgcagccatacaagc aacgattgggccgaaacccgaaagtcagctcgccatttattcaacctcatctttggtcgc gattcgaccaggatcctttccaccgtagaccgggtttgcgatatcatgaatggagttctg ccacaaagcgaaggtccctctattccagcgccagccatttgttcctcactatggaaagag gttcactctgccatccaggctcgtgatgataccgcgatagcgaatgttgttctagcctcc gcacaaaccagccatctgtccgtcctcacgaagacgtcatatcacaaaattgagagggtc gaagctcacggtcaaggcacaattgctggtgcagaggcgatcgacagcatcaatgcagcg ctagcaggcactcgctctggttttctcgacgccatctcccgatttacgaacagcagtctc tcaactactgccatgaaccttttggcgaaaccagaggtcgggcgggccgttatctcgctt ctcctatcccccatgcccgactgccaaactgcagctcaatccatcatcggcctcgcattc gacgttgacgtacgaatggactgtttccgggcaatgttcagcaatctcccgatcattacc ttcgaaggtctcaccgacttccttacgacgttccaagagcacgcgaacaaagtcccggag gcttgtacactgtccacatccctcgttcgatgtttcaacgacgttttggaggtgttgtgc tcgagccctgatggattactgctcagcaagacttttcttcgacctggagatcctcaaggc cctgcatcccgacttttgtcgttctggaaactgttgaccacatgcattaccacaattttc aaacacacgccggtctggtcaagcttttacaaagccaaggaaatgacggtgtggatgcgg gacgccctcatattaggcagggatattgtcggacagtggagactcgtcgagagcgcaatt aattccgattcagccaaaccttcgaaaggcctttcgcacgctggaaaagagatcgtggcc tgctttaaggctatgctgccgcagttcttcaaatggttgcgcttgacggatgaggagttg ctttaccagtcactggcaatcatccggaaactgctgcaagtcctccaagaaaccgacgag aaaccggacaacaccaccctcgagagattgcagcgcttcgtcgccagtgcccgcaatgac aaagaacagaagaagagccgactcgatcctgcgagcttgatggagctgggcgaagcactt tatcagtttgacgcccattccgacggcgacgacgacggcgacgagattgaaatcatctcc catgtcaaaccccccaagaaggagaaggttgacaagcgcgcagtcaaaccagttgtcaag gaggaaaagaaggttgaggtcccggctcatgtgcagcaacagcggttgctgaacaagcag ctgagcagctccaagggcaaacaatccacattcgattctcgccagaagcagttgaacttc aagtcgttgaaagacgacgaggcgaagatcaaggctgcatccaaactgccgaagttcaag aagatcgcccagcccaccgcctccacgtcgaaacctggccccaaacccgaagccgcatcc tcgaccaagacgtcgaatcctccgcaatcatcagaagctgaggagtccagtgatgacgat gatccaggagctgctctggctgccctaacggctggtcctcaactaccgaaatcccccaaa ataaggaaggaacagcgaagaacaattcagatgatggatgctagtaccgctccaaatccg aaagcagaacgtatcgagcaagccaagaaggacaggcagaaagcattgcgattacggcct gacatctccaacctccacaagattatcctttcctgggactataagcatagcggtccgtat ccaccctcgggcaattgggacccggatattttgcaacaagtacccgaggagttcagagac tacgctcaatatcatcggatcttcgagccacttctattgctcgagtgttgggcccagatt ctagggacgaaaaaggaggttccaccgagctacctctttaccgttgcctcgaagcaatac gtcagcgattggattgacatggatttctctgccaccgaccccatcccgaacgactgggac ctcagcgatgtcgacattgtcttactcgaaagtcccgacggggagaaaactgttatgggc aaagccgtcacatttaggaaaggtcaaatgggtgccgtggccaccatccggtgctacggt cagctcactgatccggggatgactatctctaccccttggaaaatcagcaagctgtacagt ttaagcacgattaaccgggagtacggagcacttctttccctaccgcacatcgaatcccaa cgcgatcagatcttccacgccaaagcagccagaatgcctgacatcgatccagctgaggtg gaaaaggccatgtcgacctacaagatcaacgagccgcaagccaccgcaattatcggggcc atggcctctacgggctttgttttgattcagggcccccctggtaccggtaagacctcgacg atctgtgctctggtggccaggtttatgtcccggcgcgcaattcctatcacggcacctggg agcaaagaagtgcccgccaagcccaaaatcctcatctgcgctccaagtaacgccgccatc gacgaaatcgcccagcgtctgaaggccaaatactgtgacggcgacccagtgaagaagctc agtattgttcgcatgggtgcccagggttcgatcggctctgcggtcaagggtgtctctctc gactccctcgtccaagacaagattcaggaagagacgggaaatcaagggtttcccactgaa gaactgaaccgccagatcagtatgttgaagatggagatggaatccttgaagcatgcgcgc gacgagaagctgaaggagatgaccaacctccaaaataactatgctcgccacaatgccttg gatcaggaaacccaggctatgggtagaaaacgtcaagccttggccgctgagctgaacaag ctacgagataaactgaaatcggatggccgtagtatggaggctctccgccggaaggcccgc tttgaaatcatcagggatgcagacgtcatctgcagtacattatctggttcaggtcatgaa gcccttctcgaccaaacattcgagatggtcatcattgacgaagccgctcaagccgtcgag cttagctcgttaatcccgctgaaatacgagagcaaacgttgcattatggtcggagatcct caacagcttcctcctactgtgatttcccaacaggctgccagcaagaagtacgatcagtcg ctcttccagaggtttttcaagaagtctccaaaggcagttcacctgttgagcatccaatac cgtatgcatcctgaaatcagtcgattcccaagcaaagctttctataacgaccgcattcaa gacgggcctaatatgaaggagctcacggctagaccatggcatgcggaacccctattaggc atttacaaaatcttcaatgtcaatggaaacgcggaagaagggccccagaattcgttaaaa aacagagccgaagtcgaggttgccacggcgttgtatcgccgcttgagcactcagttccgc gagttcgggttggaaaggaagattgggattgtgtcgccgtatcgtgcccaaatcaaggaa ctggagcgttcgtttttccaagcatttggccagtctgtcctggatgaaattgacttcaac actgtggatggattccaaggtcaggaaaaggacattattatcctttcctgtgttcgtggc ggacccggtgtgaagtcaattggtttcatggcagatgtccgtcgactgaatgtcgccatc actcgtgccaaatctgcgttgttcattctaggaaacgttccaactttggaacgtagtgaa tccatttggaagcaagcaattgcagacgctcgagagaggaaccttatcgtgaatgtggac tcgaaaacattcacccaaccaagcgccatgacttcagtaccagtgatgaaggcactgaag acaccttcgaggaagaagcctcgcttgtcaggtcctgacaacctaccttctcaatcgcaa aatttgccagctggactggccactccgaaggctcttaagaattccatgaagaagggtttc aatcctccccctaccgccgccagccttccaaacaagcctgctcagcccgtggcctcggca tcagggtcttcatcgtcaccccgccccaaactcaaaagacctgctgaggacgatggcccc aacgggctcccaccaaaaccacgcaatgggccaggcccaggtaatggacctcgacctcca ccgccaaaacgagccaagactggaatgtcgatgttcattccaaagaagaaaaagaaggtc agtcacagatcttcatttgccacaagtgtttcgctgacacccagaccagtagccatgatt taa

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