Coprinopsis cinerea (gray shag): CC1G_02937
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Entry
CC1G_02937 CDS
T01275
Name
(RefSeq) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CC1G_02937
Enzymes [BR:
cci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CC1G_02937
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Paralog
GFIT
Motif
Pfam:
RhgB_N
fn3_3
CBM-like
CarboxypepD_reg
AGA-YXIM_GBD
Motif
Other DBs
NCBI-GeneID:
6012384
NCBI-ProteinID:
XP_001835849
UniProt:
A8NRT4
LinkDB
All DBs
Position
8
AA seq
372 aa
AA seq
DB search
MKLILALIVVLPTAFAAFGVVRSGNNFVVDSGAGLVTTINANNGDITSLNYNGKQLQDQS
KFTHLSSGLGSASVTTLGEQQHRCNHYPNQHDYAFQVLFEHINNQGGDQQELYWYMNSGH
YQTESWRTGFFGPYALVITNGQAPSPDLDVSFFEDLNLQGYVRASQRGTVTGSFSGVLPG
QPVVIGFKNAAAQYWVEASGSGSGSFTRNMMKPGTYDVTLFQGELEAGAGRVTVNAGQTT
AINLSSNLSRPNVIWSIGTPDGTPRGFLNADKIEIMHPHAVPTYSSTLQVNNPTRVQWNA
NSSQIGARTLRIRTTGAFAGGRPQIYVNGRWTSHAPPEGKGSVGFVTRGTWRRDNQVYAV
IQMTSTYHLASW
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcattctcgccctcattgtagtcttaccaactgcctttgccgcctttggggtg
gtcaggtccggtaacaatttcgtcgtggactctggcgccggtctcgtaaccacgatcaat
gccaataacggtgatatcacctcgctgaactacaatgggaaacaactgcaagaccaatcc
aagtttactcatctgagctcaggactgggttccgcctctgtgacgaccctcggtgaacaa
caacatcgctgtaatcactatccgaaccagcacgattacgcgttccaagtactattcgag
cacatcaacaaccagggcggggaccaacaggagctttattggtatatgaactctggtcac
taccagaccgaatcctggcgcaccggattctttggtccatatgcccttgttattaccaat
ggtcaggctccatccccagatctggacgtatcattcttcgaggatctcaatctccaagga
tatgtacgagcctcgcagcgtggtaccgtcactggatctttctccggcgtcctccctgga
caaccggttgttatcggtttcaagaacgcagcggcgcagtactgggtcgaagcttccggg
tctggaagtggatcgttcactcgcaacatgatgaagcctggtacctacgatgtgaccttg
ttccagggggagcttgaggctggcgccggccgtgttaccgtcaacgcgggccagaccacc
gccattaacctctcgtctaacttaagcaggcccaatgttatctggtctattggtactcct
gatggcactccacgagggttcttgaacgccgataagatcgagatcatgcacccccacgca
gttcctacttattcctctaccctccaggtcaacaatccaaccagggtccagtggaatgcc
aactcaagccaaattggcgcccgaaccttgcgcatccgcactaccggcgcctttgctggc
ggaaggccacaaatctacgtcaacggccgatggacatcccatgcccctcctgagggtaaa
ggttctgttggctttgtaacccgcggtacttggcgacgagataatcaagtttatgctgtg
attcagatgacttcaacataccatctggcatcctggtga
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