Coprinopsis cinerea (gray shag): CC1G_03020
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Entry
CC1G_03020 CDS
T01275
Name
(RefSeq) VTS1
KO
K27407
RNA-binding protein VTS1
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_03020
04131 Membrane trafficking [BR:
cci04131
]
CC1G_03020
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CC1G_03020
Membrane trafficking [BR:
cci04131
]
SNARE
SNARE associated proteins
Others
CC1G_03020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
DUF6289
Motif
Other DBs
NCBI-GeneID:
6012469
NCBI-ProteinID:
XP_001835932
UniProt:
A8NS41
LinkDB
All DBs
Position
8
AA seq
613 aa
AA seq
DB search
MSLRPPSTSPSPSPGPQDAKISARQSMGPSARGTPTLAPASPRPGGQGSARPTSELLGSG
SMFQTPEAEALDQWFENLQNYEATLEDMAAASLDVNFKEELSAIEQWFKVLSEAERTAAL
YSLLQHSTQVQIRFFITVLQQMARSDPMTALLSPAMGSMQSQMEAKLATLKSPGLKSPLP
ASPTARNFNPGNRQSLALDNNSNFLSPDSAANANSNNNNDAAATLAQQRAKLKASNAAHR
ISAPVLASSGSDARASWGPSQLSQVSEQQGPTQEIIINPSRPKSSDFSGTIASPRPGESN
QSESWASMVSTPHLTMFPKPAEPPKVESHWSRNPAPSVPKMGDPTTRRRNKVNNDGNNQP
GSNTGVYDDNGNPIGGQGGNNRNVSGGWGSRSPALSTNSSNRFGGNDDNNGMNGLGMQMN
GFGVGLSSPTLGMGLPGLGVPPLSPFNMNMGMLSAMGMTPEAQAQLLAAQMAATGFGQPN
WLGMQPMSAGLGNQRRNMSGGRSPGLKSASSVGSRADSGTPKAEEDVNPELLNDIPAWLR
SLRLHKYTPNFEGCTWKEMVVMDEAQLEAKGVAALGARRKMLKTFEMVRKKMGIEGGPPP
SAPPSAAPSVKSP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcgacctccttctaccagccccagcccctctccagggccccaagatgctaaa
atcagcgcccgtcagtcgatgggcccatctgcgcgtggaacgccgactctggcacccgct
tcgcctcgtcctggaggacagggaagcgccagacccaccagcgagctcttgggtagcggt
tcaatgttccaaacacccgaagcggaggcgcttgatcaatggtttgaaaatctgcaaaac
tatgaagccactctggaggatatggctgcagcttccctcgacgttaatttcaaagaagaa
ctcagcgccatcgagcaatggttcaaggttctttctgaagcagagcgcacagccgctctt
tacagtcttcttcaacattccactcaagtccaaatcaggttcttcatcaccgtcttgcag
cagatggcgagatcggacccgatgaccgccctgttgagccccgctatgggctccatgcaa
agtcaaatggaggccaagctggccaccctgaagtcgcctggtctcaagtcgccccttccg
gcttccccgactgctcgcaacttcaaccccggaaatcgtcaatctttggccttggataac
aattccaacttcctctcccccgactctgctgccaacgctaactccaacaacaacaatgat
gcggcagcgactcttgctcaacagcgtgcgaagctcaaggccagcaatgcggcccatcgc
atttctgcccctgttctcgcttcgagcggttctgatgctcgtgcttcttggggtccttct
caactcagccaagtcagcgaacaacaaggcccgacccaagagatcatcatcaacccgtcc
cgccccaagagcagcgacttctccggcactattgcttcacctcgtcctggagagagtaac
cagagcgagagctgggcgagcatggtctccactcctcatctgaccatgttccccaagccg
gcggaaccacccaaggttgaatcacactggtccaggaaccctgctccttccgttccgaag
atgggcgatcccactacccgtcgtcgcaacaaggttaacaatgacggcaataaccaacca
ggatcaaatactggtgtctacgacgataacggaaacccgattggcggacaaggaggcaac
aacaggaacgtcagcggaggctggggttctagaagcccggcgctttctaccaactcttcg
aacaggttcggaggaaacgacgacaacaacggcatgaacggattgggtatgcaaatgaac
ggctttggtgttgggctaagcagccccaccctcggcatgggtcttcctggcctgggtgta
ccaccgttgagtcctttcaacatgaacatgggcatgttgagtgccatgggtatgacaccc
gaggcccaggcgcagcttcttgcggcgcaaatggccgcgactggcttcggccaacccaac
tggctcggtatgcagcccatgtctgctggcttgggcaaccaacgacgcaacatgtctgga
ggtcgatcccctggattgaagagtgcgtccagcgttggtagccgtgccgacagtggaacc
cccaaggctgaagaggatgtcaaccccgagttgctgaacgacatcccagcttggttgagg
agcttgcgcttgcacaagtatactcccaactttgagggttgcacttggaaggagatggtg
gttatggatgaagcccagttggaggcgaagggtgtcgctgctttgggagctaggaggaag
atgctgaagacgttcgagatggtcaggaagaagatgggaattgagggtggtccacctccc
agcgctcctcccagcgcagctccctccgtcaagtccccttaa
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