Coprinopsis cinerea (gray shag): CC1G_03415
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Entry
CC1G_03415 CDS
T01275
Name
(RefSeq) NOT2 family protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC1G_03415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_03415
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CC1G_03415
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CC1G_03415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
6012168
NCBI-ProteinID:
XP_001835633
UniProt:
A8NQN0
LinkDB
All DBs
Position
8
AA seq
593 aa
AA seq
DB search
MPPRNVNVLQAAGYVPGLQPNSHRTPSQQSVQSMTPQPTPGFMQARAQSSYAFGAGTLGQ
HQASAGLQQQQQLSSQQQQQANGTSNSMPPHLSQSSVIGTPSISSTSEVALDPNDFPALG
STSTNNTTTSTPANVTNATSYASHAGTAASLGGSGTGANAGTIGGGSGNQPRDFTQDDFP
ALGGQSHANQSQNPSGNQSSSQDSIPHPPGLNGFQHDFQSRARSLIGDLTSSGLQGTPGL
LNLQHTQTRNVHPGFQQGQPESEKQQRNLKLSQPAHAVSNPSNLTSRSQQTGGSATNGAG
QASLASHLNPPPGVPPPTGSYAQQGDANNANPNGSSHPNAAAATSNPNPAGHPQHPQTPA
QQILISAADRWGLLSLVALMKNASTELDHGLSSIGTDLGTMGLDMSFPGNLYSTFITPWA
DQSAAHQVEPDFRLPPCYLSVQAPPPGPMKAALFSDETLFFMFYSSPRDALQEVAAQELW
NRNWRWHKDLRLWITKESGTAPSQKVPGGEQGLYTYWDPENWSKERKDMTVLYADLEEKS
QPAFLHGPGLVLAQQHQGQGATQPHTPSGQLNAQLPSQITPSQRASFQMGVTA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaggaacgtcaatgtcctacaagctgcaggttatgttcccggacttcaaccg
aacagtcatcgaacgccttcccaacaatcagtgcagagtatgacccctcagccaaccccg
ggattcatgcaagcaagagcgcagagcagttatgcctttggtgcaggtacccttggccag
catcaagcatcggcaggtttgcagcaacagcagcaattatcgtcccagcagcagcagcag
gccaacggaacctccaattcgatgccaccccatctatcgcagtcctctgtaatcggtact
ccctcaatatcctcaacgagcgaggttgcactcgaccccaacgattttcctgcccttgga
tcaacatcgacaaataacacgaccaccagcacgcccgcaaacgttaccaatgcgacgagc
tacgcaagccatgcaggtaccgccgcttcattaggtggttcagggaccggagcgaacgct
gggacaattggaggcggatcagggaaccaaccgagggactttactcaggacgattttcct
gcccttggaggccagtcacacgcgaaccagagccaaaacccatcaggaaaccagagctca
agtcaagacagcatacctcatccccctggcctgaacggtttccaacacgacttccaaagc
cgtgcaaggagcttgataggggacttgacatcctccggcctgcaaggtacacccggtttg
cttaatttgcaacatacccaaacacggaatgtccatccaggtttccaacaaggccagcca
gagagtgaaaagcaacaaaggaacctgaagcttagccagccagcgcatgccgtttcgaat
ccatccaaccttacatctcgttcacaacaaaccggcggtagtgctaccaacggcgcagga
caggcctctttagcatcacatctcaacccacccccaggcgtaccaccgccgacaggatcg
tatgctcagcaaggtgatgccaataacgcaaaccccaacggaagctcacatcccaacgcc
gccgctgcaacgtcgaacccaaacccggcgggtcaccctcagcatccgcagacgcctgct
cagcagattctcatcagtgcagcagaccgatggggcctgttatcacttgttgctttgatg
aagaatgcgagcacggagcttgatcacggtctgagtagcatagggacggacttggggacg
atgggtttggacatgtcgttccctgggaatctctattctacgttcatcacaccctgggca
gaccagtctgcagcacaccaagtggagcccgacttccggctaccaccttgttacttgagt
gtacaggcaccacctccaggaccaatgaaggctgcattgttcagtgatgagacactattc
ttcatgttctattcaagcccaagagacgcccttcaagaggtggctgcgcaagaactgtgg
aatcgtaactggcgatggcacaaggaccttcggctgtggatcacaaaggaaagcggtact
gcaccttctcaaaaggtgccaggcggcgagcagggcttgtacacgtactgggatcctgaa
aactggtccaaggagaggaaagatatgacagttttgtatgctgatttggaagagaagtcg
caaccagccttcctgcacggtccaggactcgtgttggcgcaacaacaccagggtcaagga
gcaactcaacctcatacaccatcgggccaattgaatgctcaattaccgagccaaattacc
ccatcccaacgagcttcattccagatgggtgtaacagcgtga
DBGET
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