Coprinopsis cinerea (gray shag): CC1G_03667
Help
Entry
CC1G_03667 CDS
T01275
Name
(RefSeq) pre-mRNA splicing factor
KO
K11096
small nuclear ribonucleoprotein D2
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC1G_03667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cci03041
]
CC1G_03667
03032 DNA replication proteins [BR:
cci03032
]
CC1G_03667
Spliceosome [BR:
cci03041
]
Complex A
U1 snRNP components
Sm proteins
CC1G_03667
U2 snRNP components
CC1G_03667
Complex B
U1 snRNP components
CC1G_03667
U4/U6.U5 tri-snRNP components
CC1G_03667
Complex C
U2 snRNP components
CC1G_03667
DNA replication proteins [BR:
cci03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CC1G_03667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DUF3752
Motif
Other DBs
NCBI-GeneID:
6005299
NCBI-ProteinID:
XP_001828873
UniProt:
A8N1X4
LinkDB
All DBs
Position
1
AA seq
130 aa
AA seq
DB search
MSQYVHVPKSELDEAQLRQLEEHEISQGPLSVLQQAVRNHAQVLISLRNNKKLLARVKAF
DRHSNMVLENVKEERPSPFTTIQEPRLMVNSQMWTETPKGKNKKPVNKDRFISKMFLRGD
SVILVLRNQA
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatacgttcatgttccaaaatctgaactagatgaagcccagcttcgccaactc
gaggagcatgaaatctcgcaggggccactatcagtgcttcagcaagcagtccgcaaccat
gctcaagttttgatctctctgcgcaacaacaaaaaactgctggctcgagtaaaagccttt
gacagacatagtaacatggtcctggagaatgtcaaggaggaacgtccatcccctttcact
actattcaagagcctcgtctgatggttaattcacagatgtggaccgagacccccaaggga
aagaacaagaaaccagtcaacaaggataggttcatcagcaagatgtttttgcgaggcgac
tcagtcatcctggttctgcgtaatcaggcatag
DBGET
integrated database retrieval system