KEGG   Coprinopsis cinerea (gray shag): CC1G_03667
Entry
CC1G_03667        CDS       T01275                                 
Name
(RefSeq) pre-mRNA splicing factor
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CC1G_03667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cci03041]
    CC1G_03667
   03032 DNA replication proteins [BR:cci03032]
    CC1G_03667
Spliceosome [BR:cci03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CC1G_03667
  U2 snRNP components
    CC1G_03667
 Complex B
  U1 snRNP components
    CC1G_03667
  U4/U6.U5 tri-snRNP components
    CC1G_03667
 Complex C
  U2 snRNP components
    CC1G_03667
DNA replication proteins [BR:cci03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CC1G_03667
SSDB
Motif
Pfam: LSM Hfq DUF3752
Other DBs
NCBI-GeneID: 6005299
NCBI-ProteinID: XP_001828873
UniProt: A8N1X4
LinkDB
Position
1
AA seq 130 aa
MSQYVHVPKSELDEAQLRQLEEHEISQGPLSVLQQAVRNHAQVLISLRNNKKLLARVKAF
DRHSNMVLENVKEERPSPFTTIQEPRLMVNSQMWTETPKGKNKKPVNKDRFISKMFLRGD
SVILVLRNQA
NT seq 393 nt   +upstreamnt  +downstreamnt
atgagtcaatacgttcatgttccaaaatctgaactagatgaagcccagcttcgccaactc
gaggagcatgaaatctcgcaggggccactatcagtgcttcagcaagcagtccgcaaccat
gctcaagttttgatctctctgcgcaacaacaaaaaactgctggctcgagtaaaagccttt
gacagacatagtaacatggtcctggagaatgtcaaggaggaacgtccatcccctttcact
actattcaagagcctcgtctgatggttaattcacagatgtggaccgagacccccaaggga
aagaacaagaaaccagtcaacaaggataggttcatcagcaagatgtttttgcgaggcgac
tcagtcatcctggttctgcgtaatcaggcatag

DBGET integrated database retrieval system