Coprinopsis cinerea (gray shag): CC1G_03878
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Entry
CC1G_03878 CDS
T01275
Name
(RefSeq) cap-binding protein CPB20
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03013
Nucleocytoplasmic transport
cci03015
mRNA surveillance pathway
cci03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC1G_03878
09122 Translation
03013 Nucleocytoplasmic transport
CC1G_03878
03015 mRNA surveillance pathway
CC1G_03878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_03878
03041 Spliceosome [BR:
cci03041
]
CC1G_03878
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
CC1G_03878
Spliceosome [BR:
cci03041
]
Common components
Common spliceosomal components
Cap binding complex
CC1G_03878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
6010159
NCBI-ProteinID:
XP_001833661
UniProt:
A8NH24
LinkDB
All DBs
Position
2
AA seq
194 aa
AA seq
DB search
MGLDRNTRTPCGFCFVEYYTHAEALASMRYVSGTKLDERIIRCDLDLGYKEGRQFGRGKS
GGQVRDEHRQDYDPGRGGWGAQAQRLEIERRREVEERYADAQDGPGAVASGGGDWKQAEA
PPEENKLKRGRSPEDDGDAMRDMTCGFPGSRDMCSSSTTRMASSSESRMTMNREYREYAP
EGLKQVIQHPKIEG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgggcctagatagaaatacaaggacgccgtgcggattctgcttcgttgagtactacacc
catgcagaagcgcttgcaagcatgcgctacgtcagtggtaccaaactcgacgaacgaatc
atccggtgcgacttggatctcgggtacaaggaaggacgacagttcggacgcggcaagagt
ggtggacaggtaagagacgaacacaggcaggactacgatcctggccgcggtggatggggt
gcacaggcacagagattggagattgaacgacgaagagaagttgaggagcggtatgccgat
gcgcaggatggccctggtgcagtggctagtggaggaggcgactggaagcaggcggaggca
cctccagaagaaaacaaactcaaacgagggcgttcccccgaagacgacggcgacgcgatg
cgtgatatgacgtgcggttttcctggtagtcgcgacatgtgcagttcgtctacaacccgt
atggcttcctcttccgagtcaaggatgaccatgaaccgcgaatacagggagtacgctcca
gaaggtctaaagcaagtcattcagcacccaaaaattgagggctaa
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