Coprinopsis cinerea (gray shag): CC1G_04178
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Entry
CC1G_04178 CDS
T01275
Name
(RefSeq) SNF2 family domain-containing protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CC1G_04178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_04178
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CC1G_04178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
6009842
NCBI-ProteinID:
XP_001833199
UniProt:
A8NF46
LinkDB
All DBs
Position
2
AA seq
840 aa
AA seq
DB search
MLRRPPTTSDGKVVDRLSESTRVNKPFKPPTVAKPVERVQPQRKRKRVSYAGQQNEDSDS
DDDGNSKKKKKSDGGKDKDGIYHNEDELWAMHKKYPVYKPKPFDQITRRFSLPTMRSKDG
SIVPLVPTGASLGTRPPAKIIPRPLHDPMEDHAIVLYDPTIDDRETDEERQERLKQEAKE
KAEQEAKEKTAGLYNPHKSLKKLLGETEKDKAKVDKVPVVIDPRLSKVLRPHQVEGVKFL
YRCTTGMVEENQYGCIMADEMGLGKTLQCIALMWTLLKQSPHPGRPTIEKCIIACPSSLV
KNWANELTKWLGKDTVTPLAIDGKGGKAELLEKVARWVAARGRNVTQPVMIVSYETLRTL
TVYLAGCKIGLLLCDEGHRLKNSESLTFQALNSLDVNRRVILTGTPIQNDLSEYFSLLNF
ANPNFLGSKNDFRKNFENAIIRGRDSDASDAVKAASEAKLKELGGLVMKFIIRRTNDLLS
KYLPVKYEQVVFCGLSDFQLALYRLFITSPEIKALLRGTESQPLKAINILKKLCNHPELL
DLPKDLKGSDHLIPEGFVGAGQQQQGRGAGRNVGVRCDWSGKFLVLERLVHSVRAGPSVT
EPSNRFLHQIHTQTNDKIVLISNYTQTLDLFEKLLRSKKYGYFRLDGTMSITKRQKLVDQ
FNDPNGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFV
YRFISTGTIEEKIFQRQASKQALSSAVVDEKEDTERHFSLDSLRQLFTFNEKTLCDTHET
FKCKRCKDGKQMVKSPALLYGDASTWNHFTNPELKNNHDDLLRAEVGLPEVSFVFQYISH
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaagaccgccaacgacgtcggatggtaaagttgtcgacaggctatccgagagt
actcgagtcaacaagccgttcaaaccgcctacggtcgccaaaccagtagaacgtgtccaa
cctcagcggaagcgcaaacgtgtctcgtatgccggtcaacagaacgaggacagtgactct
gacgacgatgggaactctaagaagaagaagaaatcggatggagggaaggacaaggatggg
atttaccacaatgaggacgagctgtgggctatgcacaagaaatacccggtgtacaagccc
aagcctttcgatcagataacccgacggttctctctgccgaccatgaggagtaaggatggg
tccatagtaccgctggtaccgactggtgcatcattaggaacacgaccacctgcaaagatc
atcccacgacctctccatgacccaatggaagaccatgccattgttctctacgaccccacg
attgacgaccgagagacggatgaagaaagacaagagaggttgaagcaggaggcgaaagag
aaggcagagcaggaagcaaaggagaagacagcagggctgtacaatcctcacaagagcttg
aagaagttattgggagagactgagaaggacaaggccaaggtggataaagtgccggttgtt
atcgaccctcgtctctcaaaggtgctgaggccgcaccaagtggagggtgtcaagttcttg
tatcgctgtacaaccggtatggtcgaggagaaccagtatgggtgtatcatggcagacgag
atgggtctcggaaagacgctgcagtgtatagcgctgatgtggacactcctcaaacaatca
ccacacccgggaagaccgacaatagagaaatgtattatcgcatgcccctccagtttggtc
aagaactgggccaacgaactcacgaaatggctgggcaaggatacagttacacctctggct
atcgatggcaagggcggtaaggcagagttattagagaaggttgctcgatgggttgctgct
cgggggcgcaacgtgacgcagccggttatgattgtctcgtacgaaactctgaggaccctt
actgtctacctcgctggttgcaagattgggttgctcctatgtgatgaagggcaccggctt
aagaactccgaatcgctgactttccaagccttgaactctttggatgtcaatcggcgggtc
atcttgactggtactcccatccagaacgatctttccgaatacttctccctcctcaacttc
gccaatcccaatttccttggttcaaagaacgacttcaggaagaactttgagaatgctatc
attcgaggacgcgactctgatgctagtgacgcggtgaaggctgcaagcgaagctaaactc
aaggaactcggtgggctggtgatgaagttcatcatccgacgtaccaacgacctgctttcc
aaatacttgcctgtcaagtacgagcaggtggtcttttgtggtctatcggatttccaactg
gctctgtaccgacttttcatcacctcacccgagattaaggccctgctgcgtggaaccgag
tcacagccgctcaaagccattaacattctgaagaaactttgcaaccatccagaattgttg
gatctccctaaggatttgaaaggaagcgaccatctcatcccagaaggcttcgtcggtgct
ggtcagcagcagcaaggccgaggtgcagggcgcaacgtcggcgtccgttgcgactggagt
ggaaagttcctcgtactcgagcggttagtccattctgtccgcgcaggtccatccgttact
gaaccctccaacagattccttcaccagatccacacgcagacaaatgacaagattgtactg
attagtaactatacccagacactcgacttgttcgagaagttgctgagaagcaagaagtat
ggttacttcaggttggatggaaccatgtccatcaccaaacggcagaaactagtggatcag
ttcaacgatccgaacgggaaggaattcatcttcctgcttagtagtaaggctggaggatgc
ggtatcaacttgattggcgccaatcggcttatcctctttgatcctgattggaatcctgct
gctgatcagcaagcgttggctcgtgtgtggcgtgacggccaaaagaaagagtgcttcgtc
tatcggttcatttcgactggtacaatcgaagagaagatcttccagagacaggctagtaag
caagcattgtcatctgcggttgtggacgagaaggaggacacggagcgacatttctcgctc
gactcgttacgtcaactattcacctttaacgagaagacattgtgtgacacgcacgagact
ttcaagtgcaagcgatgcaaagacgggaagcagatggtcaagtcgcccgctttgctttat
ggtgatgctagcacttggaaccactttacgaatcccgagctcaagaacaaccacgatgat
cttctgcgggccgaagttggactgcccgaagtttctttcgttttccaatacatcagtcat
tag
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