Coprinopsis cinerea (gray shag): CC1G_04208
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Entry
CC1G_04208 CDS
T01275
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cci03021
]
CC1G_04208
03036 Chromosome and associated proteins [BR:
cci03036
]
CC1G_04208
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CC1G_04208
Chromosome and associated proteins [BR:
cci03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CC1G_04208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Spt6_S1
Tex_central_region
SH2
HHH_9
S1
HHH_3
DUF6877
S1_RRP5
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
6009724
NCBI-ProteinID:
XP_001833229
UniProt:
A8NF94
LinkDB
All DBs
Position
2
AA seq
1551 aa
AA seq
DB search
MASPTLEEFTHFQNEEEDVPMTTHEEEDGEGEGEADDVAMRNLDDSSEEESEDEEEERRI
REGFIVDEDEEEEEEDEEEERERRRRRKRRKRHHRRREEEEQLEEDDLELLEENTGTSHK
NRLRRLRRGRESESPPAASSSKRRAIIESSDEDLDRDDGRNRSSAVHDLWDDEKRGDDDD
DGMDTDSFIEYSDDEAGGQEGREERRRAQKQDAERRRRARGARPELAGIDINAWDELHDV
FGDGEDYNWALELDDDIEQMDYLKPDMRYQDVFEPSEIRRRHLTEDDDLIRARDVPERMQ
LASSALSQSSSLSLYGVMAEDDLGGAAMWVTQRLPLRKTHQFFASDGEYQHLKSHLVMAV
TFVLKSLFVDQYEVPYIWVHKRDYISHFDTNDPKNRFELLGLSELWIIMNLGQKYRSLLE
RRKTLTTFYERLQVNDEYFDSDLLPQVDSIEFVADATEWLTMKYRDRKEEQQQQPELRFH
DDEEPQPEVKKPKMPSRISAYEIAKKSIVSKLAEGFGIEPHQVVQNYFNMGAVNTHYVED
PELNPIAFAEQYVDPDPVKAQSPEALLARARMVMATELGKDPLLRKEIRKLFQEEALISV
EPTERGIAKIDDHHPYFNFKYLFRKRVKDMTTSSQFLLILTAEAEHLVTVSVFLPPAVLQ
TFEKRLSDAICSDSFSDSAKAWNMERNLVVQEVLEKHLIAVGVKWTREWLRDEVEDFLAQ
KCAEKLRERVDVAPYMRRSLGEGEYASSVLAVSWGKGDPHKDPITMVFLDTAGRLRAQTK
IDNLYDQDNLDEFHDLIGQKRPDIIVIGGFSMATVKLKQRITEVLSAQAYSQDGALIRPE
FQINVNYVPDDVARIYQHSERATEEFSSLSLTAKYCVGLARYMQSPLNEFAALGPDVAAI
SFDEEDQHLVPKEKLLLALERVLVDVTNAVGVNINRSVSDPYYQHLLQFVCGLGPRKANA
LVAKIASLGGNLVNREQFIKAGVLTTKIFLNAAGFLRITQYKGEARLDKHRHDDDNAPDP
LDDTRIHPEDYELARKMATDALELDEEDIHDEHPSHVVNLIMVDREREKKLMELNLDEFA
ISLYEANQDQKRHTLSLIRNELLHPFADQRRLFRFPEGWEIITMLSGETPRTLRVGVIVS
AVVNRINSGFVNVRLDSGIEATINAQYIADKPDNPNKLVKKGQTVTGVIIDCRIEEDNKE
TLFVELSTRNREVQDGDQAFRRVAHDEHWNQAQHDKDKDALERKKRQQTDRSRRVIKHPN
FHNFNYAQAEAYLEKQQRGDVVIRPSSRGNDHLAVTWKVDTGLYQHIDVVEKNPDPTGQT
AGGQLYVDDNHVYADLDELIVNHVQAMARRVEDLMNHEKFKPGTEEDLHLFLKNFLAANP
MKSMYGFTLNRKKPGNFSLCFLANKNSTVQTWPIRVTPEAYYLFDASAVGVSELCDAFKV
RHLHESQTRAAQAQNGGKTPFGAGHGRTPARPIGAATPGHASVRHVGRTPNPYGHNPMVP
QPPYGSSTYGYQTPSHRPHPNMPPPGGQGPPRPPMHVQQNNPGSGWGQGGW
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcccacacttgaagaattcactcattttcaaaacgaggaagaagatgtccct
atgaccacacacgaagaagaggacggcgagggggaaggggaggcagacgatgttgcaatg
aggaacctggacgatagctcggaggaggagtcagaggacgaagaggaagagaggagaatt
cgcgagggttttattgtcgacgaagatgaggaagaagaagaggaagacgaggaggaggaa
cgtgaaagaagacgccgtcgcaaacgccgaaagaggcaccaccgtcgccgcgaggaagag
gaacaattggaagaggacgatctcgagttactggaggaaaacactgggacgtcacacaag
aatcgtctcagacggttacgacgcggtcgcgaatccgagtctccgccagcggcatcttca
tccaagcgacgagctatcattgagtcttcagacgaggacctcgatagagacgatggtcgc
aatcgtagctccgcggtacatgacttgtgggatgatgaaaagcgaggcgacgacgacgac
gatggaatggatacagacagctttattgaatacagtgacgatgaagcggggggacaagaa
ggacgagaagaaaggcgacgtgctcagaaacaggacgcagaacgtcgtcgacgagcacgt
ggagcgcgcccagagcttgctggaatcgatatcaacgcatgggacgaactgcacgacgtg
ttcggggatggggaagattacaactgggcgttggagcttgacgatgacattgagcagatg
gattatcttaagcctgacatgagataccaggatgttttcgagccgagtgaaattcgacgc
cgacacttgacagaggacgacgatctcatccgagcaagagatgttccggaacgcatgcaa
cttgcttcttccgccctgtcacaatcttcgtcattgtcgctttacggagtcatggctgaa
gatgatctagggggagctgctatgtgggttacccagaggctacctttgcggaagacccac
cagttctttgccagcgatggcgagtaccaacacctcaagagccacttggtgatggctgtc
acctttgtactcaagtccctcttcgtcgaccagtacgaagttccctatatctgggtccac
aagcgtgactatatatcccacttcgacaccaacgaccccaaaaatcgttttgaattgctg
ggcctttccgaactctggatcatcatgaacctgggccaaaaataccgctcacttctcgaa
cgccggaaaacgctgacgaccttttacgagcgccttcaagtcaacgatgaatatttcgac
tcggaccttctaccccaggttgacagcatcgagtttgtggccgacgccactgagtggttg
actatgaagtacagagacaggaaggaagaacaacagcagcaaccggaattgagattccac
gacgatgaagagccacaaccagaagtcaagaagcctaagatgccaagtcgcatatctgcc
tatgaaatcgctaaaaagagcatagtttccaaactggcagagggtttcggtatcgagcct
caccaagtcgtccagaactatttcaacatgggggctgtcaacacccattatgtcgaagat
cccgagttgaatcccatcgcctttgctgagcaatacgtcgatccggacccagtgaaggcc
caatctccggaggcgctcctcgcacgtgcccgcatggtcatggctacagagctcggcaaa
gaccctctcctgcgcaaggaaattcgaaagctcttccaggaagaggctctcatctccgtc
gagcccacagaacggggcatcgcaaaaatcgacgaccatcatccttactttaacttcaaa
tatctattccgaaagcgagtcaaggacatgacgacctcctcccaattcttactcattctc
accgcggaagccgaacatcttgtcactgtctccgttttccttcctcccgctgtccttcag
acctttgagaagaggctgtccgatgctatctgttcggacagcttcagcgattctgccaaa
gcttggaatatggagcgcaacctcgtagtgcaggaagttctcgagaaacatctcattgcc
gttggtgtcaagtggactcgcgaatggctgcgcgatgaagtggaggacttccttgcacag
aaatgtgcggagaaattgcgagagcgcgttgatgttgctccgtatatgcgtcgctccctt
ggcgagggcgaatatgcctcgtctgtgctagccgtctcatggggcaagggcgaccctcac
aaggatccgatcactatggttttcctggacactgctggacgtcttcgcgcccagaccaag
atcgacaatctctatgatcaagacaacctggacgagtttcacgacctaattggtcaaaag
cgaccagatatcatcgtcattggagggttcagcatggccacagtcaaactcaagcagcgg
attacggaagttttgagcgcgcaggcttacagtcaagatggagctctaatcagaccagag
ttccaaataaatgtgaactacgtccccgacgatgttgccaggatataccaacatagtgag
cgggcaactgaggagttcagctccctctccttgacggcaaagtactgcgttggcctagcc
cgttacatgcagagtcctctgaacgagttcgctgccctcggtccagacgttgcagccata
tccttcgacgaagaagaccagcatttagttcctaaagagaagctgctgttggccttagag
cgcgtcttggttgatgttaccaacgctgtgggcgtcaacattaaccggtccgtctctgat
ccatattatcaacacctcctgcaattcgtttgtgggcttgggccaaggaaggcgaatgcc
ctcgtcgcaaaaattgcgtcgttgggaggaaatctcgtcaaccgggaacaattcatcaag
gctggtgtgttgaccaccaagatcttcctcaacgcggcaggcttcctgcgtatcactcag
tacaaaggcgaagcgcgacttgataaacaccgacacgacgatgacaacgccccagaccca
ttggatgacaccaggatacaccccgaggactatgagttagcacgcaaaatggcgaccgac
gcattggaattggatgaagaggatatccacgacgaacacccgtcgcatgttgtcaactta
atcatggtggaccgagagagggagaagaagctcatggaattgaacttggacgagttcgca
atcagcttatacgaggccaatcaagaccagaagcggcatacactcagcctcatccggaat
gagctcctccatccctttgctgatcagcgaagattgttccggttcccggagggatgggaa
atcattaccatgcttagtggcgaaaccccccgcactttgcgtgttggtgtcattgtgtcc
gctgtcgtcaacagaatcaacagcggcttcgtcaatgtccgactggattctggcatcgag
gcaactatcaatgctcaatacatcgcagacaagcccgataatcccaacaagcttgttaag
aagggtcagaccgtcaccggcgttatcatcgactgcagaatcgaggaagacaacaaagag
acgttgttcgtcgagctatcaacgcgtaacagggaggtccaggacggagaccaagccttc
aggcgggtcgctcatgacgagcattggaatcaagctcagcacgacaaggacaaggacgct
ctcgaacgcaagaaacgtcagcagacggataggtcccgcagggttatcaagcatcccaac
ttccacaacttcaattacgcgcaggccgaggcgtatcttgagaagcagcagcgcggcgac
gtcgtcatccgcccttcatcgaggggcaacgaccatttggctgttacttggaaagtggac
actggtctttaccaacacattgatgtcgtcgagaagaacccagatcccacgggccagaca
gcgggagggcagctctatgtcgacgacaaccacgtatatgcggacttggacgagctcatc
gtcaaccatgtccaggcaatggcacgtcgtgtggaagatttgatgaaccacgagaaattc
aaacctgggacagaagaagacttgcacctattcctcaagaacttcctcgctgcaaatcct
atgaagagcatgtacggtttcacactcaatcgcaagaagccaggcaacttcagcctctgc
ttcctcgccaacaaaaactcgactgtgcaaacctggccaatccgggttactcctgaagca
tactatctattcgatgcttccgctgtcggtgtctccgagttgtgcgatgccttcaaagtt
cgccatcttcacgaatcgcaaactcgggcagcccaagcacaaaatggcgggaaaaccccc
tttggtgcgggacatggtagaacaccagcccgacctattggcgctgccactcctggccat
gcatctgtacgacatgttggccgaacgcccaacccgtatgggcacaaccccatggtaccc
caacctccatatggttccagcacttacgggtaccagactccgagccaccgaccccacccc
aacatgccgccacctggcggccagggacctcctcgtcctccgatgcatgtacagcaaaat
aaccctggttctggttgggggcaaggaggctggtag
DBGET
integrated database retrieval system
