Coprinopsis cinerea (gray shag): CC1G_04479
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Entry
CC1G_04479 CDS
T01275
Name
(RefSeq) basic transcription factor 2.35KD subunit
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03022
Basal transcription factors
cci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC1G_04479
09124 Replication and repair
03420 Nucleotide excision repair
CC1G_04479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cci03021
]
CC1G_04479
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_04479
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CC1G_04479
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CC1G_04479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Olduvai
Motif
Other DBs
NCBI-GeneID:
6006484
NCBI-ProteinID:
XP_001830046
UniProt:
A8N5A1
LinkDB
All DBs
Position
3
AA seq
280 aa
AA seq
DB search
MNDHGTLLAVVLDLSPAQWHRAANDPQPITLNAFLAQLLAFLNAHIACMHENTLAVFGAF
PGKSVMLYASTDQHQTASISVDANSYPPFKLLDNTVVTSIAAELDALDDSHDEEEVPCAL
VGALTKALCSTTPLPNGSQGVPPQLDPRILILSVSPDLSTSYIPIMNAIFSAQKLKVTID
ACQIYGGETVFLQQAAHLTGGSYLLLERRDALLQYLTSSASRVLFVAPAGQNSPSKLYNV
SMPFGDQWRSIPRGLRQHLVHQTHLLQRPRVLRPIIEHHR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccacggcaccctcttggccgtcgtcttggacctttctccggcacaatggcac
cgcgccgccaacgatccccaacctattaccctcaatgctttcctcgctcagctccttgcc
ttcctcaatgcccacatcgcatgcatgcatgaaaataccctcgccgtcttcggcgccttt
cctggcaaaagtgtcatgctgtacgcctcaactgaccagcaccaaacggcctccatctcc
gtcgatgccaactcgtatccgccgttcaagctgctcgataacaccgttgtcacaagtata
gccgccgagctcgacgctttggacgactctcacgatgaagaagaagtgccctgtgccctc
gtcggcgcgctcaccaaagctctatgctccacgacaccactgccaaatggatcccagggc
gtccctccacagctggacccaagaatcctgattctttcggtctctcccgacttatcgacg
tcctacatacccattatgaatgctatcttctcggcccagaagcttaaagtgaccatcgat
gcctgccaaatctatggcggcgaaactgttttcctccagcaagcggcgcacttaacgggc
ggatcctatcttcttctcgaacgccgtgatgctttgttgcaataccttacatcttctgca
agccgagtcctgtttgtagcacctgcaggacaaaattccccatcaaaactctacaacgtc
tcaatgcccttcggggaccaatggcggtcgattccccgcggccttcgccagcacctggtc
catcaaacgcacctactccaacggcctcgggtactccgtcccatcatcgaacaccatcgc
tag
DBGET
integrated database retrieval system
