Coprinopsis cinerea (gray shag): CC1G_04557
Help
Entry
CC1G_04557 CDS
T01275
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03040
Spliceosome
cci04139
Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC1G_04557
09140 Cellular Processes
09141 Transport and catabolism
04139 Mitophagy - yeast
CC1G_04557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_04557
03041 Spliceosome [BR:
cci03041
]
CC1G_04557
03032 DNA replication proteins [BR:
cci03032
]
CC1G_04557
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CC1G_04557
Spliceosome [BR:
cci03041
]
Complex A
U1 snRNP components
Sm proteins
CC1G_04557
U2 snRNP components
CC1G_04557
Complex B
U1 snRNP components
CC1G_04557
U4/U6.U5 tri-snRNP components
CC1G_04557
Complex C
U2 snRNP components
CC1G_04557
DNA replication proteins [BR:
cci03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CC1G_04557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
E3_binding
LSM14
Motif
Other DBs
NCBI-GeneID:
6006562
NCBI-ProteinID:
XP_001830124
UniProt:
A8N5H9
LinkDB
All DBs
Position
3
AA seq
126 aa
AA seq
DB search
MATSGLGVPVKLLHESLGHIITVELKTGQLYRGKLAEAEDNLNISLKDITVTGRDGRVSQ
LDQVYIRGSMIRFFIVPDMLQNAPMFKRVGPNAMRGRGIGTARGRATIMRARRGRGVAPA
PRGIRR
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcaggacttggagttcccgtcaagcttttgcatgaatctttgggacatatt
atcactgttgagttgaagacggggcagctttatcgtggaaagttggctgaagccgaagac
aacctcaacatctcgctaaaagacataactgtcactggacgtgatgggcgagtttctcag
ttggatcaagtgtacattcgggggagtatgattcggttctttatcgtgcctgatatgctg
cagaatgcgcctatgttcaagcgagttggacccaatgctatgaggggaaggggtattggt
acggcgcgtggtcgcgcgaccattatgcgagcacggagaggaaggggtgttgcaccggct
cctcgaggaatccgacgatga
DBGET
integrated database retrieval system