Coprinopsis cinerea (gray shag): CC1G_04569
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Entry
CC1G_04569 CDS
T01275
Name
(RefSeq) tRNA-pseudouridine synthase
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cci03016
]
CC1G_04569
Enzymes [BR:
cci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CC1G_04569
Transfer RNA biogenesis [BR:
cci03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CC1G_04569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
ThiS
Motif
Other DBs
NCBI-GeneID:
6006574
NCBI-ProteinID:
XP_001830136
UniProt:
A8N5J1
LinkDB
All DBs
Position
3
AA seq
583 aa
AA seq
DB search
MPPSPQITLLSQLNRSTKTHYRLIPVSPLEQFRHNIYNLIRTTLMSNDFDFTKPRSVPAP
PGLKKIAPYWYPYTTMTKMRWIGRELLEVVSTEFRDRSMEYYRYALESGVTTVNGQVASP
TTILKDGDRIENVVHRHEPPVTDTPVRILHRDDEREFIVVDKPGSIPVHASGRYYKNTLI
EILVHDFGIKKCYPANRLDRLTSGLMIMPLSPERARTLTEEFTAGTVKKEYVARVKGKFP
EGSVVCEQPLLTVDRQMGLNIVHPDGKPAKTVFTLIRYDENTNSSVVKCEPHTGRSHQLR
VHLQYLGHPIANDPIYSEERIWGKKCGKGGIDTTPSNERSAPAPPPHLQALTECVGSPES
LSKDASPANGDSAAPRPKLLPRETGDDIGMGSPVPLSAEAVGVITRLRNMKDEDEDWSRW
RDVVFRVKGALNPHHLVVSPPPLPNKRKKGGKATLSSKKPVNAPTNGANDSPPSEPTTPT
TTENAETTAPPNPPQYTEAEIVEKVKQADASPDGSANTTATIPAVIGESDNLYCPECYLP
LHPDPKPEKLYIFLHARKYTTSLGSFETEMPEWAAPGWTWDQS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcccccttcccctcagatcacccttctaagccaactaaacaggtcaaccaaaacccac
taccgcctcattcccgtctcgcccctcgagcaattccgccacaacatctacaacctcatc
cgcaccacactcatgtccaacgatttcgactttacaaaaccccggagcgtacccgcgcct
ccagggctcaagaagatcgcaccgtattggtatccgtataccacgatgaccaagatgagg
tggattgggagggagcttttggaagtcgtttcaacagagtttagggatcggtcgatggag
tattatagatatgctctggaatcgggtgtgacgactgtgaacggccaggtggcttcacct
actacgatattgaaagatggagaccgaatcgaaaacgtcgtccatcgccacgaaccacca
gtaaccgacactccagtccgcatcctccacagagacgatgaacgtgaattcatagtggtg
gataaaccaggcagcatccctgtccatgcttccggaagatactacaaaaacacgttgatt
gaaatcctcgttcatgactttgggataaagaaatgttatcctgcaaacaggttggaccgt
ctaacctctggactaatgatcatgcccttgtccccggaacgcgcacgtacgctcactgaa
gagtttacagctgggacagtcaagaaggaatacgtcgcgagggtaaagggaaagttccct
gaaggctctgtagtgtgcgagcagcccctcctcacagttgataggcaaatgggtttgaat
attgtccatcccgacggaaagcctgcaaagactgtcttcaccctcatccgctacgacgaa
aacaccaacagcagcgtggtgaaatgcgaaccccacactggtcgatcacatcaacttcgc
gtacaccttcaatacctcgggcatcccatcgccaacgaccctatatactctgaagagcgg
atatggggcaagaaatgcggaaaagggggcatagacaccacacccagcaacgaacgaagc
gctcctgctccccctccgcatctccaagcgctgacagagtgcgtcggaagtcccgagtct
ctcagtaaagatgcgagtcccgccaacggcgactctgcagcacccagacctaaactgctt
ccacgcgaaacgggagatgacattggaatgggttcccctgtgcctttgtcagcggaagcc
gttggtgttatcacccggttgaggaacatgaaagacgaagatgaagattggagtcgatgg
cgcgacgtagtattccgagtgaaaggtgccctcaacccacatcacctcgtagtcagccct
cctccactccctaacaaacggaagaaaggcgggaaagcaacattgtcttccaagaagcct
gtaaacgcgccgaccaatggagccaacgactcgccgccttccgaaccgaccacgcccacc
acaacagaaaacgcagaaactacagcccctccgaatccacctcaatacaccgaagccgaa
attgttgagaaagtcaagcaagccgacgcatctcctgacggttctgcaaacacaaccgca
acaatccccgccgtaataggcgaatccgacaacctttattgccccgagtgctatctaccc
ctacatccagacccgaaaccggagaagttgtatattttcttgcatgcgcgcaagtacacc
acgagtttggggtcgttcgaaactgagatgcctgaatgggccgctcctggctggacctgg
gatcagagttga
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