Coprinopsis cinerea (gray shag): CC1G_05169
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Entry
CC1G_05169 CDS
T01275
Name
(RefSeq) transcription/repair factor TFIIH subunit Tfb3
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03022
Basal transcription factors
cci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC1G_05169
09124 Replication and repair
03420 Nucleotide excision repair
CC1G_05169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cci03021
]
CC1G_05169
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_05169
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CC1G_05169
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CC1G_05169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
EPO_TPO
Med27
Motif
Other DBs
NCBI-GeneID:
6009965
NCBI-ProteinID:
XP_001833469
UniProt:
A8NG41
LinkDB
All DBs
Position
2
AA seq
347 aa
AA seq
DB search
MATRPGGWLQGRTIRKASGMPSASTTRSSTPQTVTATPNTIYGGGVKDPSGRTVEYWDMA
DQCPVSPCPICNKILRKLAFMPQTFEDLTVEKEVAVRRRIAKDFNKRREDFPDLRSYNDY
LEEVEEITFNLINEVDIPETEARIAKYKAENAAIIELNLQREEAYARALREQEEYERREK
EQRALELRRAEEEEREEKEKDKRSIIDKLETSDKDASELVAKARASAQKRTNAKAATTGF
RSTADLLRTRAAQSTEVPDVPHVPIQDDYTAYEDMFVLKPVYNDFLGDAVRRDREGIMRA
GGYMLEEAWERAIRSAVAGLEVPPLVGLDVPAPPASKLDSSGDVIMT
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggccactcgtccgggaggatggctgcagggaaggacaattcgcaaggcttcggggatg
ccctcggcgtctaccacaaggtcctcgacaccccagaccgtcaccgcaactcccaatacc
atctatggtggcggagtcaaggacccctctggtaggaccgtcgagtactgggatatggca
gaccaatgtccagtctcaccgtgccctatctgcaataaaatattacggaagttggctttc
atgccgcagacctttgaagacttgactgtcgagaaagaggttgccgttcgacggcgcata
gccaaagactttaacaagagaagggaggatttcccggaccttcgctcatataatgactat
ctggaagaagtggaagagatcaccttcaaccttatcaatgaagtcgacattcctgaaacc
gaagctcgcatagccaaatacaaggccgagaatgcagcaatcatcgaactcaacctgcaa
cgcgaggaagcttatgcacgggcgcttcgcgagcaagaggaatatgaacggagagagaaa
gagcaacgagcactcgaactacgtcgcgcggaagaagaggagcgggaagaaaaagagaaa
gataaacggagtatcattgacaagctggagacaagcgacaaggatgcgagcgagctggtt
gcaaaagcccgtgcatctgctcagaagcgaacgaacgctaaagcagcgacaaccggcttc
cgaagcactgcagacttgctgagaactcgagcagctcagagtactgaggttcctgacgtc
ccgcacgtgccaatacaggacgactacaccgcatacgaggacatgtttgtcctcaagccc
gtctacaatgacttcctcggcgatgccgtcagaagagacagagaaggcattatgagggca
ggaggctatatgcttgaagaggcttgggaacgagcaatacgaagcgcggttgccggtctg
gaggtgcctccattggtgggtctggacgtccctgcccctccagcgtctaaactcgactcc
tccggcgatgtcatcatgacttga
DBGET
integrated database retrieval system
