Coprinopsis cinerea (gray shag): CC1G_05221
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Entry
CC1G_05221 CDS
T01275
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CC1G_05221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_05221
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CC1G_05221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
6016971
NCBI-ProteinID:
XP_001840335
UniProt:
A8PC80
LinkDB
All DBs
Position
11
AA seq
962 aa
AA seq
DB search
MYGKEKDDHNDKDNTDPRFITYFHNLPKKSPDTGTLRLFSREDWYAAYGPDALYVAQNVF
HTNSVIKYLGAGGKLGLPSVTLKTSQAHALLRDALTSKQLRVEIYAPETGSGKKGTTFKL
DKEASPGNLQAVEDLLFSNSDVISAPIVMAVKLATAPMDRARLRAVGVAFADTSGRELGV
ADFTDNDLFSNLESLVIQLSVKEAIIPTGTASGTTDRDIDLNKLKAVLDRCNVIITERKP
SEFNVKNLSSDLPLLLKPSAMQSSSSADIAAVIPQLSLPNAPGALSALINYLALLGDQSN
HGAYSIRTHDLSQFMRLDASALRALNLVEGPGKLGSSKTTTIFGILNRCKTAQGGRLLGT
WLKQPLVNLHEIHKRQNLVEIFVDDTNSRRTLRDEYLKFMPDLNRIYKRFQKGVATLEDV
VRVYQVVLKLPGMVETLESVQAEDEAKLELVKEVFATTYKEAAGSLAKYGEMVEETIDLD
ELDNHNYVIKPDYDAKLQELAEQLKDVRDGLDAEHRKVGNATDMELDKKLHLENNATYGY
CFRLTKADAKKVDMDKYIEYATTKSGVHFATRKLKELAVQFKELSALYSKTQTGVVKQVV
QIAATYGPVFENLNDILAHLDVILSFAEVAVNAPTPYVKPKVVQKDSGSLILEEARHPCL
EVQEGINFIPNNVEMIKNKSEFQIITGPNMGGKSTYIRQVGVIALMAQVGSFVPCSEAEL
PVFDSILCRVGAGDSQLKGVSTFMAEMLETATILRSATKNSLIIIDELGRGTSTYDGFGL
AWAISEHIASEIHAFCLFATHFHELTNLDQQIPHVKNFHVVAHVNKDAGGESASKDNIVL
LYRVEPGVSDQSFGIHVAELANFPEDVVKLARKNAEELEEFKATEDKGQQEFPPEVIDSG
IETMKSFFEAWTGQTASADGDVDMDVDEDDTEAQLKALRENLAKFQPQIEGNPWLQSLVA
SF
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaaagaaaaagacgaccacaacgacaaagacaacaccgacccgcggttcatc
acctacttccacaacctacccaagaaatctcccgacactgggacactgcggctgttctcc
agggaggattggtatgcggcgtacggccctgatgcgctgtatgtcgcgcagaacgtcttt
cataccaattcggttatcaagtaccttggggcggggggcaagttgggactgccaagtgtg
acgctgaagacgagtcaggcgcatgcgctgttgagggatgcgttgacgtcgaaacagctg
agggtggagatatatgcgcctgaaactggctctgggaagaaagggacgacgtttaaattg
gacaaggaggcctcgccgggaaacctgcaagccgtcgaagacctcttgttctcgaattca
gatgttatttctgccccgattgtcatggctgtcaagttagcgaccgcaccaatggacagg
gcgcgactgagggctgtaggtgtcgcgtttgcagacacgagtggtcgggaattgggcgtg
gcagactttacggacaatgatctattctcaaacttggagtcgctggtgattcaactgtct
gtgaaggaggctattatcccaactggaacggcaagcgggacgaccgaccgcgacatcgac
ctcaacaaattaaaagcggtgttggatcgctgcaatgtcattatcaccgaacgcaaacca
agcgagttcaatgtcaaaaatctcagcagcgatctcccacttctcctcaaaccatcggcc
atgcaatcaagctcttcagctgacatcgctgctgttattccgcaacttagcctgcctaat
gcccctggcgcgctttctgcgctaatcaactatttggcactgctgggagatcaaagcaac
cacggagcgtactctatccgcacgcacgacctttcccagtttatgcgtctcgatgctagt
gctcttcgcgctcttaaccttgtcgaaggtcctggaaagcttggttcgagcaaaaccacg
acgatattcggcatcttgaataggtgcaagactgcacagggtggcaggttgcttggtaca
tggctcaagcaacctctagttaaccttcatgaaatccataagcgtcaaaatttggttgag
attttcgtagacgacaccaacagtcggaggacgttgcgagatgaatacctcaaattcatg
cctgacctgaacagaatctacaagcggttccagaaaggagtggcgacgcttgaggatgtc
gtccgcgtgtatcaggtcgttctcaagcttcctgggatggttgagaccctggagtctgtt
caggctgaagatgaagccaagctcgagctggtaaaagaagtctttgctacgacatacaag
gaagcggctggaagtctggccaaatacggcgagatggtcgaggagaccatcgacctggac
gagcttgacaaccacaactatgtcatcaaaccagactacgatgcgaaacttcaagaattg
gccgaacagttgaaagatgtccgtgatggtttggacgctgaacatcgaaaggttggaaat
gccacggacatggagttggacaaaaagttgcatttggagaacaatgcgacttatgggtat
tgcttcaggttgaccaaggctgacgccaagaaggtcgatatggacaagtacattgaatat
gcaacgacgaagagtggtgtccatttcgcgaccagaaaactcaaggagctggctgtgcaa
ttcaaggagctctcggctttgtattcgaagactcagactggcgttgttaagcaggtggtt
cagattgctgcaacttatgggcctgtgtttgagaatctaaacgatatcttggcgcatttg
gatgtgattttgagtttcgctgaggtcgctgtgaacgccccgacaccttatgtcaaacca
aaggtcgtgcaaaaagattcgggcagtttgattctagaggaggcgaggcatccttgtctc
gaggttcaagaggggatcaacttcattcccaataacgtcgagatgatcaagaataaaagc
gaattccagattatcactgggccgaacatgggtggaaaatctacctatattcgccaggtc
ggcgtcattgcgctcatggcacaggtcgggtccttcgtgccttgctctgaagccgaactt
cctgtcttcgactcgatcctgtgtcgtgtgggtgctggagacagccagctgaagggcgtg
tcgacttttatggccgagatgttggagactgcgactattttgaggtctgcgaccaagaat
tccctgatcattatcgacgagctcggccgtggaacgtcaacttatgatggcttcggactc
gcgtgggcgatttcagaacatatcgcctccgaaatccatgctttctgcttattcgcgact
cacttccacgaactaaccaatctggaccagcaaatacctcacgtgaagaacttccatgtc
gttgcgcatgtcaacaaggacgctggtggggaaagcgctagcaaggacaatatcgtcctg
ttgtaccgcgtcgagcccggagtttcggatcagagctttggtattcacgtcgcagagctg
gccaacttcccggaagacgttgtgaagcttgcgaggaagaatgcggaggaattggaagag
ttcaaagcgacagaagataagggccagcaagagttcccacctgaagtcattgattcgggt
atcgagacaatgaagtctttctttgaagcttggactggacagacggcttcggccgatggt
gacgtcgatatggatgtagatgaagatgatactgaagctcaattgaaagcgctcagagag
aaccttgctaagttccagccccaaattgaggggaatccttggttgcagagtcttgttgct
tcgttctag
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