Coprinopsis cinerea (gray shag): CC1G_05304
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Entry
CC1G_05304 CDS
T01275
Name
(RefSeq) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CC1G_05304
Enzymes [BR:
cci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
CC1G_05304
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Paralog
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
6017060
NCBI-ProteinID:
XP_001840418
UniProt:
A8PCK0
LinkDB
All DBs
Position
11
AA seq
520 aa
AA seq
DB search
MGFRWLLRSLQLALIAKTAYAAFSLTESGNNFIVDTNAGLIFTVQRNTGDITSLRFNGIE
VQDQGSKKSHINSGLGASCTHWRGGNSNNYIKITCTAGSVTQYYIARYNDPAIHMATYTT
AQPSVGELRFIARLRRAAVPNGYRAAEIVGGTAIEGSDVFRVGSETRSKYYSSRQFIDDK
IHGVTGPGIGVWMIITETGYESSSGGPFMRDINNQGGDQQELYYYMNSGHTQTENFRTGF
HGPYALWFTTGAQPSESINTLFWQQVDIPHVVPTSGRGRVTGRASGVPSNFAGLQVVGFS
NGVAQYWTRASSNGQFTSPYMKPGTYVMTLYKVELAVASQTVTIGAGSTITSNIASTESN
PSVIWQLGDFDGTPRGFLNAEYVHFSKIETMHPSDPRMRSWGPVTFNVGDSIGNFPMALF
KAIGPVTIRFNLNSNQLGARTLEIGTTLAFAGGRPQVRVNNWNGPNPPAPSQPNSRGVTR
GTWRGNNTRYVVNIPAGTLVAGTNTIVINVISGSSGDGFL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggcttccgctggcttcttcgctccttacaacttgcattaattgcaaagactgcctat
gcagcattcagcttgaccgagtctggtaacaacttcatcgtcgacacgaacgccggcctc
atcttcaccgtgcaaagaaacaccggcgatattacatctttgcgattcaacggtatcgag
gtgcaagaccagggcagcaagaagagtcacattaactctggccttggcgctagctgtact
cattggcggggcggaaatagcaacaactacattaagatcacttgcaccgctggcagcgta
actcagtactacatcgcccgttacaatgaccccgccattcacatggctacttataccact
gcccaaccctccgtcggcgagttacgctttatcgcccgtctccgcagagcagctgtcccc
aatggctaccgcgccgcagagatcgttggcggcacggctatcgagggcagtgatgtcttc
cgagttggctctgagaccaggtcaaaatattattcctcccgccaatttatcgacgacaaa
atccatggtgtgactggtcctggaattggggtctggatgattattaccgagactggatat
gaaagcagctctgggggacccttcatgcgtgatatcaataaccaaggaggggatcaacag
gaactttattactacatgaactctggccacacccaaactgagaatttccgcaccggcttc
catggaccttacgcactctggttcacaaccggcgcccaaccttcagagagcatcaacacc
ctcttctggcaacaagtcgatatcccacatgtcgttcccacttctggtcgcggtcgtgta
acaggtcgagcctccggcgtcccatccaacttcgccggcctccaggtcgtcggcttcagc
aatggtgttgctcagtactggacccgtgcctcgtcaaacggacaattcacctcgccttac
atgaagcctggaacatatgtcatgacattgtataaggtcgaattggctgtggcaagccag
actgtcacaatcggtgctggttctaccatcacttccaacattgcttccacggagtccaac
ccttccgtcatctggcaacttggtgacttcgacggcacccctcgcggattcttgaacgcc
gagtatgtccatttctctaaaatcgagactatgcacccaagcgaccctcgcatgcgttct
tggggccctgtcaccttcaacgtcggggactccatcggcaacttccccatggcgctcttc
aaggcaatcggcccagtcactatccgcttcaacctcaactcgaaccagctcggcgcgcgt
actttggagatcgggactactctcgcttttgctggcggcagaccacaagtgagagttaac
aactggaatggaccgaacccacccgctccttcccagcccaactcccgaggtgtaacccgt
ggtacctggagaggcaacaacacccgctacgtcgtcaacatccccgctggaacactcgtc
gctggtactaacacgatcgtgattaacgtcatctctggatcttctggagacggattcttg
tga
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