Coprinopsis cinerea (gray shag): CC1G_05708
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Entry
CC1G_05708 CDS
T01275
Name
(RefSeq) ATP-dependent RNA helicase dbp9
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cci03009
]
CC1G_05708
Enzymes [BR:
cci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CC1G_05708
Ribosome biogenesis [BR:
cci03009
]
Eukaryotic type
Pre-60S particles
Helicases
CC1G_05708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CDC45
Merozoite_SPAM
Motif
Other DBs
NCBI-GeneID:
6008111
NCBI-ProteinID:
XP_001831637
UniProt:
A8N9Y1
LinkDB
All DBs
Position
7
AA seq
633 aa
AA seq
DB search
MAPEHLVDKKTSFSSFANVLDSRILRALADMGFARPTLVQAKAIPLALESRDILARARTG
SGKTAAYCIPVVQKILSAKNGLDEDDPKRRATRALILVPTRELAEQVSGYLRTLLVYCDQ
EVTLCNATSGSASHLQKQLLADQPDILIATPSRTLSLVQSKALSLGSIDSLVIDEADLIL
SYGHDDDVRQLFKGSHFPKVYQSFLMSATMTEDVEMLKGLTLRNPAILKLEEGEDEAALL
TQYAVRCSEVDKFLLTYVILKLKLIKGKCIIFVNDVDRSYRLKLFLEQFSIKSCVLNSEL
PLNSRYHTVQEFNKGVYDYIIATDEAGVQDEYDTEDEDEGDGEGEEFTSTQRGEADENEA
SEEEESPKKSKNQGKKRKRVDSPEPSSKSKKRKQSKHVSDKEYGVTRGVDFVDVACVLNF
DLPTSSRSYTHRVGRTARAGRTGMSLSFVVPRELWGKDKVVGGLPSAEHDEKVFKRIEKE
QGARGSTIKEYNFDMKQVEAFRYRMQDALRSVTRAAIREARVKELKTEILNSDKLKAHFE
DNPLDLEYLRHDKPLHPARVQPHMKHIPKYLLPRIAPAVNAEASSGAEGTESKGFVPFKK
NTSNNRGRGRGRGRGGSAGRGRRKNDPLKKFGR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggctccagaacacctcgtcgacaagaaaacatcattttccagctttgcaaatgtactg
gacagcaggatattgcgagccctagcggatatgggctttgctcgaccaactctagttcaa
gcaaaagctatcccactcgctttggaaagtcgagacatattggcaagagcacggactggt
agtgggaagactgcggcgtattgcattccagtagttcagaagattctgagtgccaaaaac
ggattggacgaggacgatcccaaacggagggctacgagagcgttgattctggttccaaca
cgcgagctggcggagcaggtttcggggtacttgcggacgctgttggtttattgtgatcaa
gaagttacactttgtaatgcgacttctggatctgcgtctcatttacaaaaacaactactg
gcagatcagccagatatccttattgcaacaccctcccggacgctttccctggtgcagtca
aaagcactatcccttggttctatcgactcccttgtcatcgatgaagccgaccttattcta
tcatacggtcacgacgacgatgtcagacaactcttcaagggctctcacttccccaaagtg
taccagtcattcttgatgagtgcaaccatgacggaggacgtagaaatgctcaagggattg
acgcttcgtaatcctgcaatcctgaaactggaggaaggagaggatgaagctgctttgctt
actcagtacgctgttaggtgttctgaagtggacaagttccttttgacatatgtcatcctc
aaactcaagctcatcaagggcaagtgcatcatcttcgtgaacgacgtcgacaggtcatat
cggttaaagttgttcttggaacaattctcgataaagagttgcgtcctcaactcggagctg
cctttgaactcgcgttaccatacggtacaagagttcaacaagggtgtttacgactacatt
atcgccaccgacgaagcaggtgtccaggatgaatatgacacggaagatgaggacgagggt
gatggggagggagaggaatttacttcgacgcagcgaggcgaggcagacgaaaacgaagct
tcagaagaggaagaatcgcccaagaagtccaaaaaccaaggcaaaaaacgcaaacgcgtc
gactcacctgagccatcctccaaatccaaaaaacggaagcaaagcaaacatgtcagtgac
aaggagtacggtgttacacgaggtgtcgatttcgtggatgttgcttgcgtcctcaacttt
gacctacccacttcctctcgctcgtatacgcacagagtcggtcgaacggcacgagctggt
cgaacgggaatgtcgctctccttcgttgtgcctcgggagctctggggaaaggataaggtt
gtgggtggattgcccagcgcagagcacgatgagaaggtgtttaagaggattgagaaggag
cagggggcgagagggagcacaatcaaagagtacaattttgatatgaagcaagtcgaagcg
ttccgatatcgaatgcaggatgcgctcaggagtgtgacgcgtgctgctattcgggaggcg
agggtgaaggagctgaagacggagattctgaattcagataaactgaaggcccacttcgaa
gataacccccttgatctggagtacctcagacacgacaagccgcttcatcctgcccgagtg
cagcctcatatgaagcatatccccaaatacctcctccctaggatagcgcccgccgtcaac
gcagaagcgagttccggagctgaaggaacagaatcgaaagggttcgtgccattcaagaag
aacacgagtaacaacaggggccgtggtcggggaagagggcgtggaggtagcgctggcaga
gggaggaggaagaatgatcctctgaaaaagtttggtcggtga
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