Coprinopsis cinerea (gray shag): CC1G_05939
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Entry
CC1G_05939 CDS
T01275
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_05939
Enzymes [BR:
cci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CC1G_05939
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CC1G_05939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
6008316
NCBI-ProteinID:
XP_001831840
UniProt:
A8NAI8
LinkDB
All DBs
Position
7
AA seq
609 aa
AA seq
DB search
MRLLTWNINGVRTLPQYHPWNTLKTFDDILNHLESDIICFQEMKSGRKLLTQEVAVPPSF
DSFFSFPIKKTGYSGVATYTRSKVAVPLKAEEGLSGILQPKPPLAPEERISNYATYPPNL
LDDDMHDADDDRLDYKNLDSEGRAIVVDMGLFVLINTYCPNDGTGTEEREAFKMDYHRLL
ETRVRGLIEKEKREVIVVGDLNACAAVIDHCEGELMIKKGQAMGLEGEEGFWGKEYRRWI
RDWLVKEDGTGGTLVDITRKLWPDREGMYTCWNTKISARETNYGTRIDFILVTPGLVPWI
KASDTLPNIKGSDHCPVYADFHDSIVDPSTGKTIHLADVLGASKRDGKIPDPPRIAAKNW
EEFSGKQTSLQQFFKGSAKKPASNSTSDTPSGTPSLRPKDSLTRKPSSPDPPLQLPEQNV
SDVARPSVEASSSASPITVDPKADITASASSNTTKRKLVGDYTSQPKKLKKAASASGSSS
TKKLTKNGQSSIASFFSQPSTATKASGSRKGKEKGRDVEMVPDEDEDYKLALLLSQEQGQ
EPFLPSSQSSQPETQERSKQQWTSLLAPIQPPKCKAHGEPAKEYTVNKPGPNKGKRFFIC
SRQVSCRDS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgctgacctggaatattaatggcgtccgaactctacctcagtatcacccatgg
aatacgctcaagacgttcgatgatatcttgaaccacttggaatccgatattatctgcttt
caagaaatgaagagcgggcgaaagctactgactcaagaggtagccgtgccaccttctttc
gactcgtttttctcctttccaatcaagaaaacagggtactccggggtcgcgacatacaca
cgctcaaaggtggccgtaccactgaaggctgaggagggtctgtcagggattctccaaccg
aaaccaccgctggcgcccgaggaacgaatatcgaattacgcgacctatcctcctaacctc
ttggacgatgacatgcacgacgcagacgatgatagactggactacaagaacctcgacagt
gaaggacgggctattgtcgtcgacatgggtctattcgttctcatcaacacgtattgtccc
aacgacggcactggtacagaagaacgcgaggcattcaagatggattaccaccggctcctc
gaaacacgcgttaggggcttgatagagaaggagaagcgcgaggtcatcgtagttggcgac
ctaaacgcgtgtgcggctgtgatagaccactgtgaaggagagttgatgatcaagaagggg
caggcaatgggtctcgagggcgaagagggattctgggggaaagaatataggcggtggatt
agggattggcttgtcaaagaggacggtaccggcggaacgcttgtcgacatcacgcggaag
ctttggcctgatagagaggggatgtatacttgctggaacacgaaaatctcagcccgggaa
acgaactacggaacgcggatagattttattctggtgactcctggtctcgttccgtggatc
aaagcgtcagatacccttcccaacatcaaggggagcgaccactgtccagtctatgccgac
ttccacgactcgattgtcgatccatccacaggaaaaaccatccaccttgctgatgtattg
ggggcatccaagagggatgggaagattccggacccccctcggatagcagccaagaactgg
gaagagttctcagggaaacagacgtcacttcagcaattcttcaaaggctctgccaagaag
cccgcctcaaactcgacatccgacacgccctctggtacccctagtcttcgcccaaaggac
tctctcactcgcaaaccatcatctccagacccaccgctccagctgcctgagcaaaatgtt
tctgatgtggcccggccttccgtggaggcatcctcgtccgcttctccgattaccgttgac
cccaaggcggacattaccgcttccgcgtcttccaacacaacgaaacgcaagctagttggg
gactatacctctcaacccaagaaactcaagaaagctgcgagcgccagtggatcttcttca
accaagaagttaaccaagaacggccagagtagcatcgccagtttcttctctcagccttcg
actgcgaccaaggcctcaggttcaaggaagggcaaggaaaagggtcgagatgtcgagatg
gttccggatgaggacgaagactacaaactcgctttgctgctttcacaggaacaaggtcaa
gaaccatttcttccttcgtcccagtcatcgcaacctgaaacacaagaacgaagcaaacaa
caatggaccagtctcctggcgcccattcagccaccaaagtgcaaagcccacggggagcca
gcgaaggagtacaccgtgaacaaacctggcccgaacaaagggaaaaggttcttcatctgc
tcgaggcaagtcagctgtcgagattcctag
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