Coprinopsis cinerea (gray shag): CC1G_06434
Help
Entry
CC1G_06434 CDS
T01275
Name
(RefSeq) DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03022
Basal transcription factors
cci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC1G_06434
09124 Replication and repair
03420 Nucleotide excision repair
CC1G_06434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cci03021
]
CC1G_06434
03400 DNA repair and recombination proteins [BR:
cci03400
]
CC1G_06434
Enzymes [BR:
cci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CC1G_06434
Transcription machinery [BR:
cci03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CC1G_06434
DNA repair and recombination proteins [BR:
cci03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CC1G_06434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
6012892
NCBI-ProteinID:
XP_001836349
UniProt:
A8NU05
LinkDB
All DBs
Position
4
AA seq
848 aa
AA seq
DB search
MSIKRGPEDYSKPAKRPRRNDDDEYLDIADEDDVIPPSPPDTSLVPRAATINFTALTRRL
AEGRKSNDDPAEMTSLEAHRRKQDALVSHIFMDQDFSWLHLKPDHASRPLWISPEDGHII
LEAFSPIAEQAQDFLTAISEPVSRPAFIHEYKLTSYSLYAAVSVGLQTEDIIEVPVPETI
VNFIRERTLSYGKVKLVLKHNKYFVESSHPETLQFLLKDKIIREARSQAPVVDSSIKAST
FTTAKAPVRGNLAIPGTKEPEKKDGATNMPNTSDAQLFTSVVGVESDDIEEDDDNVHAFE
IDDAKIDDVKKRCNELEYPMLEEYDFRNDTINPNLDIDLKPATTIRPYQETSLSKMFGNG
RARSGIIVLPCGAGKTLVGITAACTIKKSTLVLCTSSVSVMQWRQQFIQWSNITDRQIAV
FTADQKEKFAGESGIVVSTYSMVANTHNRSHDSKKMMEFLTSREWGFILLDEVHVVPAAM
FRRVVTTIKAHSKLGLTATLVREDDKIADLNYMIGPKLYEANWMDLAAKGHIANVQCAEV
WCPMTPEFYREYLREQSRKRMLLYCMNPNKFQACQFLIRYHEGRGDKVIVFSDNVYALEA
YAKHLGKPYIHGATGQVERMRILSHFQHSPLVNTIFLSKVGDTSIDLPEATCLIQISSHF
GSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMFYSTKRQQFLIDQGYSFKVIT
HLDGLEDLPDLAYRTKDEQIELLSSVLLANESEADLGSDVRASEGDLAGTVTSLDFGGPG
RFPGVQRTTGSLTALSGAQHMSYVEQNKSANKKLAREAPSRHKLFAKREKDKAAAKKEAR
AAANLGRL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtccattaaaagaggccccgaagactacagcaaacctgccaaacgccctcgacgcaac
gacgacgatgagtacctagatattgctgatgaagacgacgttattccaccatctccacct
gatacctcccttgtaccccgagctgcaaccattaatttcactgccttgacacgacgcctg
gccgaaggtcgcaaaagcaatgatgatccagctgaaatgacgtctcttgaggcacatcgc
cggaaacaggacgccctcgtctcccacatctttatggaccaggatttctcctggctacat
ctgaaacccgaccatgcttctcgacctctctggatcagccccgaagatggtcacatcatc
cttgaagctttctctccaattgctgaacaagcacaggacttcctcactgctatcagcgag
cctgtcagcaggccggcattcatccacgaatacaaactcacctcgtattcgctctacgcc
gctgtttctgtcggcctccaaacggaggatattattgaagtacccgttcctgaaaccata
gtcaacttcatccgcgagcgaacgttgagttacggaaaagtcaagctcgtcctgaagcac
aacaaatacttcgtggaatccagccatcccgaaacgctccaattcttgctgaaggacaaa
ataatccgtgaagctcgttcgcaggcgcccgttgtcgactccagtataaaggcctccaca
tttacgacggcgaaggcccctgtgcgcggtaaccttgcaatacctggcaccaaggagccg
gaaaagaaggatggtgccactaatatgccaaatacttctgatgcgcaactgttcacttct
gtagttggcgtggaatcagatgatattgaggaggacgatgacaatgtccatgcattcgaa
atcgatgatgctaagatagacgacgtaaagaaacgatgcaacgaattggaataccctatg
ctggaggagtacgacttccgaaacgacaccatcaatcccaatcttgacatcgacttgaaa
ccggctaccactatccggccttaccaagaaactagtctgagtaagatgttcggcaatggt
cgagcacggtctggtattattgtccttccttgtggtgcgggcaaaaccctcgtgggtatc
acggccgcttgcacgatcaagaagtcgacgctcgttctttgtacatcatctgtgtcggtc
atgcaatggcgccagcagttcattcaatggtcaaatatcaccgatcggcaaattgctgtg
tttactgctgaccagaaggaaaagttcgctggtgaaagtggcatcgtagtgtcaacgtac
tccatggtcgcaaatacccataaccgatcccatgactcgaagaaaatgatggaattctta
acttcaagagaatggggcttcattcttttagatgaagtgcacgtcgtcccagccgctatg
ttcagacgcgttgtcactacgatcaaagcgcattccaagctaggcttgacagctaccttg
gtccgagaagacgacaagattgccgatttgaattacatgattgggcctaaactttacgaa
gccaattggatggaccttgctgcgaaaggacatatcgccaacgttcagtgcgcggaggtg
tggtgcccaatgacccctgaattctatcgggagtatcttcgtgaacaatctcggaagcga
atgctcctctattgcatgaacccaaacaagttccaagcgtgccagttcttgatcagatat
cacgagggtcggggagacaaggtgatcgtcttctccgacaacgtctacgctctcgaggct
tacgccaaacacctcggaaaaccctacatccatggcgcaactggtcaagtggaacgaatg
agaattctttcccacttccaacacagcccgctagtgaacacgattttcctctcgaaagtt
ggcgacacctccatcgatctcccagaggctacctgtttgatccaaatctcttctcatttc
ggctctcgaaggcaggaggcacagcgcttgggtcgcattctccgagccaaacggcgaaat
gatgaggggttcaatgccttcttttactcattggtttcgaaggacacgcaggagatgttt
tacagcaccaagcggcagcagttcttgattgatcaaggatactctttcaaggtcatcact
catcttgacggcttagaggatctacccgacctagcgtatcggaccaaggacgagcagatt
gagttgctttcatcggtgttattggcgaacgaaagcgaagctgacctgggcagcgatgtt
cgcgcgtcagagggtgaccttgcgggcacggtgacatcccttgatttcggcggacctggt
cgtttccctggagttcagcgcacgactggatcacttaccgcacttagcggagcacagcac
atgtcgtacgtcgaacaaaacaagtctgccaacaagaagcttgcccgggaagcgccttct
cgtcataaattgtttgccaaacgggagaaggacaaggccgcagccaagaaagaagccaga
gcggcagccaacctgggcagactttaa
DBGET
integrated database retrieval system
