KEGG   Coprinopsis cinerea (gray shag): CC1G_06443
Entry
CC1G_06443        CDS       T01275                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CC1G_06443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cci03019]
    CC1G_06443
   03036 Chromosome and associated proteins [BR:cci03036]
    CC1G_06443
Messenger RNA biogenesis [BR:cci03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     CC1G_06443
Chromosome and associated proteins [BR:cci03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     CC1G_06443
    COMPASS/SET1 complex (yeast)
     CC1G_06443
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 6012901
NCBI-ProteinID: XP_001836358
UniProt: A8NU16
LinkDB
Position
4
AA seq 398 aa
MAPPPNQAGPSAGSSQTLTLSDGLMARFKPAKIFKNAVEPGPPTGPHGRPSHLAAKQITG
ICFDDKGEVLITAGEDETTVRTLYSKKYGVDLPRFTHKSTSIIYASTKEDDTIRYHSLHD
NKYLQYFRGHKGRVISLEVSPVDDGFMSGSLDKTVRVWDLRSPTCRGLLALPEAPVVAYD
TTGMVFAVGVNRFSKIMLYDQANFDKAPFLTINLIDPYLTQASFPPRPIFMTSLAFSTNG
KYILVGCSGSVHYVVDSYEGHVLARLEGHVGLERRSVNAPPDIEPAKGISGEEVSWTPDS
KYVVSGSLDGKIHMWSIKRMEEILGETPSLPEGSRKPIKIQSFVQLEADASSPTRCLRFN
PRLGMFATAGTELAFWLPDTSDNPDDVAKALLKKKLGT
NT seq 1197 nt   +upstreamnt  +downstreamnt
atggccccaccgccgaaccaagctggtcccagtgcgggatcgtcccagactctaactctc
tcagatgggctcatggctcgattcaaaccagccaaaatattcaaaaatgcagttgaacct
ggtccaccgacaggccctcacggacggccatcgcacttggcagcgaagcagataactgga
atatgcttcgatgacaagggagaagttctcatcactgctggagaagacgaaacaaccgta
aggacgctgtactcgaagaagtatggtgtggatcttccgagattcactcataaaagcacc
tcgatcatctacgcttcaacaaaggaagatgacaccatccgctatcactcacttcacgac
aacaaatatctccaatacttcaggggccacaaaggacgcgttatttctctggaagtttct
ccagtggacgacggcttcatgtcgggctcgcttgacaagacggtccgcgtctgggatctg
cgttcaccgacctgtcgaggccttcttgccctaccagaagcacccgtcgtggcttacgac
acgactggaatggtcttcgctgtcggcgtgaaccgtttctccaaaataatgctctatgac
caggctaactttgacaaagcaccgttcttgacgataaacctgatagacccctacctcacc
caggcaagcttccctccacgccccatcttcatgacgtccctcgcattctccaccaacggg
aaatacatcctagtcggctgctcgggaagtgtacactacgtcgtggattcttatgagggc
cacgttctggcccgactcgagggtcacgtcggtctggaaagaagatctgtaaacgcaccg
ccggatattgaaccagcaaaagggatcagcggcgaagaagtttcgtggacccctgacagt
aaatacgtggtcagtggcagtttggacggcaagattcatatgtggtcgatcaagcgaatg
gaagaaattctgggggagacaccgtcactgcctgaaggctcgcgcaagccgataaagatc
caatcatttgttcaactcgaggcagatgcatcgtcgccaacgcggtgtttgcgattcaat
ccacgactaggcatgtttgctactgccggtactgaattggcgttctggttacccgacaca
tctgataacccagatgatgtggctaaggctcttctcaagaagaaactcggaacatga

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