Coprinopsis cinerea (gray shag): CC1G_06717
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Entry
CC1G_06717 CDS
T01275
Name
(RefSeq) DEAH box polypeptide 36
KO
K02974
small subunit ribosomal protein S24e
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CC1G_06717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cci03011
]
CC1G_06717
Ribosome [BR:
cci03011
]
Ribosomal proteins
Eukaryotes
Small subunit
CC1G_06717
Archaea
CC1G_06717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_S24e
Helicase_C
HA2_C
DEAD
dsrm
HA2_N
AAA_19
OB_NTP_bind
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
6005154
NCBI-ProteinID:
XP_001828731
UniProt:
A8N1N7
LinkDB
All DBs
Position
1
AA seq
1505 aa
AA seq
DB search
MQSPSDKAGLYPGPPVKRSLSTSHPTGSPLATAVATSKVPRVDASVVPSPFSASRRSMEK
RATVDHRPHPSGRGRGHRNVPSSHPHSSRLAGPSSGPLPRASKRLGFGKKLELPGPFHDE
AHVTELYNKSPIPIKEKHTAAPKGTLANFCSNITKEAPKYSSENGIINRGGHISLIWRIT
YPVLTWYPRSTVTVPGVDPLITATGDASEKKEAERIAALGALFQLQHRGLLDQPKKSSAA
AFKPEITLSDGSVINYERARNFMDYYCRRYKFGKVDLIQTQTTGGGPEQWETIMEINKSR
IGVGKGPSKQASRIQCYLDVTQYLQSCDPGLWNDFVEAAKSGADLGMAPRVRVSISNQLD
EAIQDLCYDIRTSSLFRKRPAKIVQQPSEASAAAIPTSGPGPNLRLEPKSKHLLHKRQQY
LVDPAMEKMRNTRQALPVYTRSKAILDHISDNEVTICMAATGSGKTTQIPQLILDDHIDR
GIGAECNIICTQPRRLAAISVAHRVSAERGEELGGSIGYQVRFEQKLPEEHGSVTFCTTG
VFLKRLQSVMSGTDPRRRREMDRVTHIIVDEVHERDVDTDLLLVVLKRIMEDRKARNLPL
KIVLMSATVDPTLFQSYFKDDSGNPAQVIDVPGRAYPVEKRFMDDFIPKLISGPSRWLVG
QESVSRYIYKQLGAEAARNLGINPANVPSDNDDLELPYPLIAATIAHALQSSDDGHVLVF
LPGWDEIMATQRALQQPLGPLPIDINNTSKYSVHLLHSTVPLQEQQVIFEPPPPGVRRVI
LATNIAETSVTIPDVVYVVDSAKVKETRYEPQRHMSALVSAWVGNSNLHQRAGRAGRHRP
GIYYGILSKAQAASLRPHQTVEMKRSDLSNVVMHVKALNFPGMSVQEVLAATIEPPEAER
VEAALKNLHMVGAIDAEQTLTPLGKVLLVLPVDAQMGRLVLYGAFFKCLDQALTLAAILS
NRDPFVSPLHLKKESTAKKNSWAPEGFRSDPLATLRAFNAWWDLQSKGQYVAANQFCFDN
FLAKPTLLLIQKVKQQLLQAMDYAGVLDVSAGGRARMVGRSVPPELNINGECWPLLAALV
AVASQPRFALRTGDVTLRTATDRLAFIHPSSVNNRRRQAAKESPDAPPEEKALYAYAEKR
QNISQGQGSSAQTFLVTTTRLDPLIYLLFGAYNAEIAERGLECDRWLPVVGDVDTLDNIQ
RLKTYMEDLFLRVYEGIVASRNRMRETMPLIPRERESEDDYDYEIDRNELPLSNQEIQEL
DRLTQSIVQILRRYSEERMESQSRSNSRPATPMTSPGRFSARLPGGSQTSGYNTPFQSRP
GTPSSLAHWWTKRLYSTKPPPEFAEKAHNLQVLLAPTGRHQGPQAGKIDMADSSAPVTLR
TRKFITNRLLARRQFVVDILHPGRPNVSRSDLAEKLAALYKTDKDRVVTFGLRTQFGGGR
STGFALIYDDEESQKKFEPRYRLVRSGLAPKVEKASRKLRKERKNRAKKLRGTKKVKAAE
APKKK
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcccatcggacaaggcaggactatatcctggtccaccagtgaagcgctctctg
tctacctctcatccgacaggctcaccgttagccacggcggtcgcgacttccaaggtccct
agggttgatgcttccgtcgtcccgtctccgttctctgcatcacgaaggtcgatggaaaag
agagcaacggtagaccatcgccctcacccatccggtcgtggaaggggtcacagaaatgta
ccttcgtcacatccacactcctctcgtctagctgggccgagcagtggtccacttccccgt
gcttcaaaacgtttggggttcggcaagaagcttgagctgcctggaccattccatgatgaa
gcgcatgtcaccgaactgtacaacaagtcgccaatacctatcaaggagaaacatacagca
gccccaaagggcacactggccaatttttgctcgaacattaccaaagaagctccaaaatat
tcctcggagaacggtataatcaaccgcggagggcacatctcgctgatatggagaatcacg
tatcccgttctgacctggtatccaaggtccactgtgacagttccaggcgtcgatccactt
ataacagcgaccggagatgcaagcgagaaaaaggaagctgaaaggattgccgcacttgga
gccttgtttcagttacagcatcggggcttgctcgaccagccaaagaagtcatcagccgca
gcatttaaacccgaaatcaccctctcagacggtagcgttatcaactatgaacgcgctcgc
aactttatggattactactgtcgccggtacaaattcggaaaggttgaccttatccaaacg
caaaccacggggggcggccctgagcaatgggaaaccatcatggaaatcaacaagagtcgt
atcggcgtaggaaaaggtcccagcaaacaagcttcgaggattcagtgttacttggacgtg
acacagtatctacaaagctgtgatcccgggctctggaatgactttgttgaagctgcgaaa
tccggtgccgatttgggcatggcaccccgagtacgagtgagcatcagtaaccagctcgac
gaggccattcaagatctttgctatgacattcgaacgagttccttgtttcgcaaacgacca
gccaagattgtacaacaaccttctgaagctagtgccgccgccattccgacttcaggccct
ggaccaaacctacgtctggaacccaagtccaaacatctgctacacaagcgccaacagtac
ctcgtagacccagcaatggaaaagatgaggaacactcgccaggccctgccagtctacacc
cgttccaaggcgatccttgaccacatcagcgacaacgaagtcacaatatgcatggctgca
actggatctggcaaaacaacgcagattcctcaattaatcctcgacgaccacatcgaccgt
ggcataggcgctgaatgcaacatcatttgcacacaacctcggcgtttggctgctatatcc
gttgcccatcgtgtctcagccgagcgaggcgaagagttgggtggttccataggctaccaa
gtgcggttcgagcagaagcttccggaggagcatgggtcagtaaccttttgcaccaccggc
gtgttcctcaaacgactccaatctgtaatgtcgggcactgacccgaggaggaggagggag
atggatcgcgttacacacatcatagtggatgaagtccatgaacgggatgtcgacaccgac
ctgctattggtggtactcaagcgtatcatggaggatcgaaaagcgcgaaacctacctctc
aagattgtcttgatgagcgctacggtggacccgaccctcttccaaagctacttcaaagat
gactcagggaatcccgctcaggtcatcgatgtgcctggccgagcgtacccggtcgagaaa
cggttcatggacgacttcatcccaaagttgatctcgggaccgtcaaggtggcttgttggg
caggaatccgtatcccggtacatctataagcagcttggtgccgaggcggcgcgaaacctt
ggaatcaaccccgccaatgtgccctcggacaatgatgatctcgagcttccctatcctctc
atcgcagccacaatcgcccatgcgcttcagtcttccgatgatggccatgttcttgtcttc
cttccaggatgggacgagatcatggcgactcaaagagccctccagcaaccgctaggtcct
ctcccgatcgacatcaacaacacgtccaaatactctgttcatcttctccattccaccgtc
ccgttacaagaacaacaagtcatcttcgagcctcctccgccgggtgttcgaagggtcatc
cttgccaccaacattgctgaaacctccgtcaccatccccgatgttgtctacgtagtggat
tcagccaaggtgaaagaaacacgatacgagccgcaacgacatatgtctgccctcgtttct
gcatgggtcggcaactccaacttgcatcaacgagctggccgtgcaggccgccaccgccct
gggatttactacgggattctgagcaaggcacaggcagcctcgttacgtccccaccagacg
gtcgaaatgaagaggtcggatttgagcaatgtagtgatgcacgtcaaagcgctcaacttc
cctggcatgtcggtgcaagaagttctcgcagcaacgattgagccccctgaggcagagcgt
gttgaggctgccctcaagaatctgcacatggtcggggccatcgatgctgaacagaccttg
accccactcggcaaggtgctgctggtattgcccgtcgatgcacagatgggccgcctagtt
ctctatggcgctttcttcaagtgcttagatcaagccctaacacttgccgcgatcctatcc
aaccgcgacccttttgtgtcacctcttcatttgaagaaggaatctactgccaagaagaat
tcgtgggcaccagaagggttccgttcagaccccttggccaccctgcgagcattcaatgcc
tggtgggatctgcagtccaaagggcaatatgtcgctgccaaccagttctgtttcgataac
ttcctcgccaaaccgaccttgcttctcatccaaaaggtcaagcaacaacttctgcaggcg
atggactacgctggtgtattggatgtttcagcaggcggacgagccaggatggttggtcgt
tcggttccaccagaattgaacatcaacggggagtgttggcctttgctggccgctctggtt
gctgttgcgtcgcaacccaggtttgctctccggaccggggatgtgactctacggacggcg
acagacaggttggctttcatccatccgtcaagcgtcaataatcggagacgacaggccgca
aaggaatcaccagacgccccgccagaggaaaaagccctttacgcttacgccgaaaaacga
caaaacatatcacagggccaaggatcgagcgctcaaacatttttggttaccacgacgcgt
ctggatccattgatttatctgcttttcggtgcatacaatgccgagattgctgagcgtgga
ttggaatgcgacaggtggctccccgttgtcggtgatgtcgataccctggacaacattcag
cggttgaagacgtacatggaggatttattcctccgagtgtatgaaggcattgttgcaagc
cgtaaccgcatgcgtgaaaccatgcctctgatcccccgtgaacgagaatcggaagacgac
tacgactacgagatcgacagaaacgaactgccactctccaaccaagaaatacaagagcta
gaccggttgactcaaagtatcgttcagattttaaggaggtacagcgaagagaggatggag
tctcaatccaggagtaactcgagacctgctacaccaatgacttcgcccggaaggttttcg
gcgaggctccctggtggatctcagacctcggggtacaacaccccattccaatcacggcca
ggaacccctagcagccttgcacactggtggacaaagcgactgtacagcaccaagccacca
ccggaatttgccgagaaggctcacaatcttcaggtgttgttggcgccgacaggacgacat
caaggaccccaagcgggaaaaatcgacatggccgactcatcagcacccgtcactctgcga
acacgcaaattcatcaccaaccgactcctcgcccgtcgccaattcgtcgtcgacatcctc
caccctggtcgtcccaatgtctcgagatctgatctcgctgaaaagctcgcagcactttac
aaaaccgacaaggaccgtgtcgtaacattcggtctccgaactcaatttggtggtggaagg
agcacgggtttcgctctcatctatgacgatgaggagtcgcagaagaagttcgagcccaga
taccgactggtgcggtccggtcttgctcccaaggtggagaaggcttctcgcaagctgagg
aaagagcgaaagaaccgtgccaagaagctccgcggcaccaaaaaggtcaaggctgccgaa
gctcccaagaagaagtaa
DBGET
integrated database retrieval system