Coprinopsis cinerea (gray shag): CC1G_06738
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Entry
CC1G_06738 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC1G_06738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_06738
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CC1G_06738
mRNA degradation factors
5'-3' decay
Lsm complex
CC1G_06738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
6005178
NCBI-ProteinID:
XP_001828752
UniProt:
A8N1Q8
LinkDB
All DBs
Position
1
AA seq
116 aa
AA seq
DB search
MLVVLRDGRKLHGVLRSYDQFANLVLEDTYERIYHRNMFAEQHHGLFLIRGENVVLMGEI
DLDKEDDVPLKQVEYHQLEPYHIKELEHKKLHEEAKAQYLFEHNGFSREGGEGDGY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgctggttgtccttcgagacggcagaaagctacacggcgtattacgatcttatgaccag
tttgccaacctcgtgttagaagacacctacgaaaggatatatcatcggaacatgtttgca
gaacagcaccatggtctctttttgattcgaggggagaatgtcgtactgatgggcgaaatc
gacctggataaagaagatgatgttcctctcaagcaggtagaataccaccagctcgaacca
tatcatatcaaggaacttgaacacaagaaactgcacgaggaagcgaaagcgcaataccta
ttcgaacataatggtttctcgcgagaaggtggtgagggtgatggatactag
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