Coprinopsis cinerea (gray shag): CC1G_06805
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Entry
CC1G_06805 CDS
T01275
Name
(RefSeq) exoribonuclease
KO
K07573
exosome complex component CSL4
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC1G_06805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_06805
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CC1G_06805
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
CC1G_06805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
6005245
NCBI-ProteinID:
XP_001828819
UniProt:
A8N1S7
LinkDB
All DBs
Position
1
AA seq
206 aa
AA seq
DB search
MSTTSTQQQVLLPGQQISVRAPAPQLGTGTYSRDAQIRASLLGAPKLQGSTLTIPQVRPH
PPAPNSVVLGSVTRLSPLQAFLSITVVDGIPLPAGEEFTGVIRSQDVRATEKDRVKIGDC
FRGGDVVRGVVISLGDARSYFITTARNDLGVIYATSEAGKSRSHLTIRLVSDLATGATLE
PVSWQEMRCPKTGKIEKRKCAKPENM
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaacgtccacccaacagcaggtcctgctccctggccagcaaatatccgtccgt
gcaccagcaccccagctgggaacaggtacttattcaagagatgctcaaataagagccagt
ctgctcggagcccccaagctccaaggctctactctcacaataccccaagttcggccccat
ccccccgctccaaattccgtggtcctgggctcagtaacccgtctctcgccgttacaagca
ttcttatccataaccgtcgtcgatggcatcccactgcctgcaggagaggaatttacaggc
gtaattcggtcgcaagatgtccgagccacagaaaaagatagagttaaaatcggcgattgc
ttccgaggcggcgacgtcgttcgcggcgtggtgatatcgctcggtgacgcccgcagctac
tttatcaccaccgcgcgcaacgatctgggcgtcatttatgcgactagtgaagcaggcaag
tccaggtctcacctaacaataagattagtctctgatctcgctacaggagcgacccttgag
cctgtttcttggcaggaaatgcgttgtccaaagacgggaaaaatagaaaagcgcaagtgt
gcaaagccggagaatatgtag
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