Coprinopsis cinerea (gray shag): CC1G_06865
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Entry
CC1G_06865 CDS
T01275
Name
(RefSeq) lateendosome to vacuole transport-family protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci04138
Autophagy - yeast
cci04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CC1G_06865
04148 Efferocytosis
CC1G_06865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cci04131
]
CC1G_06865
Membrane trafficking [BR:
cci04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CC1G_06865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
TPR_VPS8_2
VPS8_N
WD40_2
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Clathrin
Beta-prop_WDR3_1st
WD40
Herpes_UL16
RMC1_N
Beta-prop_HPS5
Beta-prop_WDR3_2nd
Beta-prop_THOC3
ANAPC4_WD40
PEP5_VPS11_N
WDR55
Arc
WDR54
Motif
Other DBs
NCBI-GeneID:
6007044
NCBI-ProteinID:
XP_001830599
UniProt:
A8N6Z3
LinkDB
All DBs
Position
3
AA seq
1358 aa
AA seq
DB search
MSRASSVSNLRGRSSSPLSRSPSNGQRPSISEREVFRWSELHTITNQVFSKASQKASSVL
GKATFSTPTVIASNGMICLGLEDGRVLVYDFKQTLKAICGNESIGKTMGPVTALALSHDH
TCVATGHANGHIQLYDLRKPTSPIRSVSPTTLDVVATGRKEGHLQGSRIVSIGFIAGRHT
ALVSADEHGLAFYHSLGKMLFVEAADILRILGQYPEPIPPPEALQSPPSAPLTANRKVRY
VVLSMAPLPLGTNPHPTDAYNVVALLTPTKLVVVGLKPTPKTWFKIPREPEEGRLSKSRM
KGTLAWFPSVARPSPNGPTGNQAVSVKQKDGTVEQGTEPILAYSWGNSLRIIKVVEARFK
QRVMSLKTGKTNEIDIGTIGYEVVGRYMAEETITAMQWLHANQIVLVTRSSMVVYDIQLS
RILEHAKFDGLALMSPTLDRTANGSVSYSDAAADTAHSLRVYKGKMFLLARDRVLVGTML
TWADRILSLVEAGDFLGAIELCRTYYTNEAPGNRNGLPDDPELRQTVIGDKLRSLMVASA
TYAFSEDRLTDETHRTPGGVDRTPLFEGLVSTCCRAAIALDDFYFLFEDLFQLYDDSGIA
TIYLRQLEPFILDNEIRYVPPRITQRLIALHEVDGHPEYVERIIWHMDPACLDLNQTIQL
CQKFRLYDALIYIYTRALQDYVAPVVELLGLIRRIYQLWRTESLGLENPNPSDDESPDSL
AQNAYKIYPYLANILSGLSFPSEEPLPEDEANTAKKSLYSFLFFGRSNVWPPGNDGKLVL
TAIEEGGVEPTYPYARQLLRFDSEAFLHSLDIAFEDSFLNDESRNVNRLIIVRILLEIMS
DEELTTEDVTLVNIFIARNVPKYPQFLPIAPTILHNVLIGLAEDLDPKTREDRQLAAEYL
LSVYNPHDSEQIISLFEEAGFYRILRTWYRQDRQWPSLFLTYVNDHSLHPADLFTNIDTT
LKSAARHNHRSLPTEVSQVLTDSLPTLLRMGISSTAALLDLHAPQMHEETLSVIANEFHE
DVEEAKFMYLKQLFVDSGDTEIPFTKRAIDPSRLPHAMLRTFIDLQTRLAPTDVVDVLKQ
LDSSNAISDWSEVTDICEENEAWDTVIWALNWKKEPQAALRKSESYHQQLTRRVIRSLSS
QAAIARELALLKAIGITGRDICLGHSQSLEPSEVPLEDMWFGLLSSQIHAVQSVSSSGLD
IEGEQLQGVLTQLRALVQTTFTALVSITSTEAVSFPRLFKRLVDATPTATGTHYTEFRLI
LGGMLESYRSDADMLNITKHLVERDLFENISRYTVAKRKGWAPSSGTCTVCRRPLLPSFS
TKGKSTQPVQISLSEIVVSRTGSITHKECIEAAVPVSS
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgagcctcctccgtgtctaacctacgcggaaggagttcaagtccactttctcgt
tcaccctccaacggtcaacggccatccatctcggaacgagaagtcttcaggtggtcggaa
ctgcacacgataacaaaccaggtattctccaaggcttctcagaaagcgtcgagtgttctt
ggaaaggcgacattcagtactccaactgttatcgcctcgaatgggatgatttgtttggga
ttggaggatggcagagtactcgtgtatgatttcaagcagactttgaaagctatttgcggg
aacgagtctataggcaaaacgatgggacccgttacagctctagcattatctcatgaccac
acttgtgtcgcaactgggcacgccaacggccacatacaactttacgacttgcgaaaacca
acctcacccatccgctcagtctctcccacaacacttgacgttgtggctacaggacggaaa
gaaggtcatttacaaggttccaggatcgtcagtatcggcttcatcgcaggacgacacacg
gcccttgtgtcagcggatgaacatgggctagcattctaccattcacttgggaagatgttg
ttcgtcgaggcagctgatattttgaggatactggggcagtatcctgaacctatacctccc
ccagaagccctccaaagtccaccctcagctcctctaaccgccaaccgcaaagtccgctac
gtcgttctctctatggcgcccctcccactaggtaccaacccccacccgaccgacgcatac
aacgtagttgctctacttacaccaactaaactcgtcgtggtgggtcttaaaccgactccc
aaaacatggttcaaaatcccccgtgagccagaggaaggccgtctctccaagtcacgtatg
aaagggacgttggcgtggttccctagtgtggcgaggccgtctccgaatggaccaaccggc
aaccaggccgtgtcagtgaagcagaaggacggtactgttgaacagggtaccgaacctata
ctggcatacagttgggggaattctctgaggatcatcaaggttgtggaggcgaggttcaag
caacgcgtaatgagtttgaaaacaggcaagacgaacgaaattgatattgggacgattggg
tatgaggttgtgggccggtatatggctgaggagacgattacggccatgcagtggttgcac
gcgaaccaaattgtccttgttactcgaagcagtatggtcgtctacgacatccaactctct
cggatacttgaacatgccaagtttgacggcctagcgttgatgtcgccgacactcgatcga
actgcgaatgggtctgtgtcttactcggacgctgctgctgatacggcgcatagcctgcgg
gtgtacaaagggaaaatgttccttctggctcgagatagggtgttggtaggaaccatgtta
acatgggcggacaggattctctcgctggtcgaagctggcgacttcctgggagccatcgaa
ctttgtcgcacgtactacaccaacgaagcaccagggaataggaacggattaccagacgat
ccggaacttcgtcaaaccgtcattggcgacaagctgcgaagtctgatggttgcctcggcc
acttatgccttctcagaagaccgcttaacagacgagacacacaggacacctggaggggtg
gaccggacccctctgttcgaaggcctggtctctacctgttgtcgcgcggccatcgcactc
gatgacttctatttcctgttcgaagatctgttccaactatacgacgacagtggtatagcc
accatttacctgcggcaactggagccattcatactcgacaacgaaatccgctacgtccct
ccgcggataacgcagcgcctcatcgccctacatgaagtcgacggccatccagagtacgtt
gaacgtatcatctggcacatggatcccgcctgcctcgacctcaatcaaaccatccaactc
tgtcaaaagttccgcctctacgatgccctaatctacatctatacccgtgcattgcaagac
tacgtcgcacccgttgtcgaactactgggtcttatccgccgaatctaccaattgtggagg
acggagtcgttgggtttggagaatccgaatcccagtgacgacgagtcacccgacagtctt
gcgcaaaatgcgtacaagatatacccatacctcgccaacatcctttccgggctgtcgttc
cccagtgaagaaccacttcctgaagatgaagccaacaccgccaagaaatctctttactct
ttcctcttctttggcagatccaacgtctggcctcccggcaacgatggtaaactggttcta
acagccatcgaggaaggcggggtggaacctacttatccctacgctcggcagcttctccgc
ttcgactctgaagcattcctgcattcgctcgatatcgcctttgaagattctttcctcaac
gatgagagtcgaaatgtgaatcgtctgattatcgtgcggatactgttggagattatgagc
gacgaggagctcacgacggaggacgtcacactagtgaacatcttcattgcacgcaacgtc
cctaaataccctcaattccttcccatcgcacccaccattcttcacaacgtcctcataggc
ctggctgaggatcttgatcccaaaacacgggaggatcggcaattagccgccgagtacctg
ctctccgtatacaaccctcacgacagcgagcagatcatttccctctttgaagaagctgga
ttctaccgcatcctgcggacatggtaccgacaggaccgccagtggccctccctcttcctc
acctacgttaacgaccacagtctgcaccctgccgatctcttcaccaacatcgacaccacc
ctaaagagtgcagcacggcataaccaccgatcactcccaaccgaagtgtcccaggtcctt
acagactcactaccaaccctcctccgcatgggcatctccagtacagctgccctcctcgac
ctccacgcaccccagatgcatgaggagacgctgtcagtgatcgccaacgaattccacgaa
gatgtagaggaagccaaattcatgtacctcaaacaactcttcgtggactcgggcgatacc
gaaatcccattcaccaaacgcgcaattgacccttcccgactaccccatgcaatgctccga
actttcatcgacctccaaacacggctcgcccccactgacgttgtagatgtcctcaaacaa
ctcgatagctccaacgccatctcggactggtcggaagtgaccgacatatgcgaggaaaac
gaggcttgggatacggtcatttgggcgttgaattggaaaaaggaaccacaggctgctttg
cgcaagtcggagagttatcaccaacagcttacgcgacgtgtcattcgttccttgtcttcc
caggcggctattgcacgggagcttgctctgttgaaagcgatcggaatcactggaagggat
atctgtcttggacactcccaatcgctcgaaccatcggaggttccgctcgaggacatgtgg
tttggtctgcttagcagtcagatccacgctgttcaatcggtgtcatcgagtgggttggac
attgaaggagagcaactccaaggcgtgctcacacagctccgcgcgttggtacagacgacg
ttcactgcgttggtatccatcacatccaccgaagcggtatcattccctcgcctcttcaaa
cgccttgtagacgcaacacccacagcaactgggacacactacaccgaattccgcctcatt
ctgggaggtatgctggaatcgtaccgctcggatgctgacatgctcaatatcacaaaacat
ttggtggagagggatttgttcgagaacatatcgcgttacacggtcgcgaagaggaagggg
tgggcaccgtcaagtgggacttgcacagtctgtcgccgccctctactgccaagtttctcg
accaagggcaagtcgacgcagccagttcaaatatccctcagcgagattgttgtgtctcgc
accgggtccatcacgcacaaggaatgtatcgaggcagctgtacccgtctcttcttga
DBGET
integrated database retrieval system
