Coprinopsis cinerea (gray shag): CC1G_07088
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Entry
CC1G_07088 CDS
T01275
Name
(RefSeq) ribosome biogenesis protein Sqt1
KO
K14818
ribosome assembly protein SQT1
Organism
cci
Coprinopsis cinerea (gray shag)
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cci03009
]
CC1G_07088
Ribosome biogenesis [BR:
cci03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
CC1G_07088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_SPT8
Ge1_WD40
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
6012984
NCBI-ProteinID:
XP_001836441
UniProt:
A8NUF0
LinkDB
All DBs
Position
4
AA seq
428 aa
AA seq
DB search
MASGKQRADDIEIDEHDDFEVDEGEHFITQDDILAEVPDDGDAPMDEDDDEVPDLGEGSS
GVIDDNSVQHFTGHTSSVFTVSCHPTEPLAASGGEDDLGYIWDITDGEVIVKLTGHTDSV
TSTAWSSDGELISTGGMDGKIRIWRRVGKDNYRTWEFLTELQGPDEVMFLRWHPKGNVLL
AGSNDSTLWLWQLPKGTTMQVFSGHTGAVNCGEFSPDGKKIVSACADGTLILWDPRSPTP
VFKLGPEDARFALDGITSIAINPSSTLAVVGGAAGGVRVVSLTKGDITGTLGGHTEGESI
EAITFVDLTGSGSGPGIAVTGATDGKACIWDLSTMRLRATLQHEDAITGLLTHPAPKAHI
VVSASADKTLKTWDARTGTLIKTHKAHRAAVLGSSLGLGGAVVISAGDEGLCAVFTTENT
DEDGNMQP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaaagcagcgtgcagatgacatagagatcgacgagcacgacgactttgaa
gtcgacgagggagagcactttatcacccaggacgatatcctcgccgaggttcccgacgat
ggagatgctcccatggacgaagacgatgacgaggtcccagatctcggggaaggctcctcc
ggcgtcatcgacgacaactctgtccagcactttaccggccacacttcctccgtcttcacc
gtttcctgtcacccaaccgagcccctcgctgcttccggtggagaggacgacctgggctac
atttgggatatcaccgatggagaagtcatcgtcaagcttaccggacatacggacagtgtg
acatcgaccgcttggagctctgatggagagctcatctcgaccggtgggatggacggtaaa
attcgcatttggagaagagtcgggaaagacaactatagaacatgggagtttttgactgag
ctgcagggtccagatgaagtcatgtttttgcgatggcatcccaagggcaacgttctcctc
gcgggctcaaacgactcgacactctggctctggcaattgcccaaaggaactaccatgcaa
gtcttttccggacacactggtgccgtcaactgtggtgaattcagccccgacggcaaaaag
atcgtctccgcttgtgcagatggcactcttatcctatgggaccctcgatctcccaccccc
gtcttcaaactcggccctgaagatgcccgcttcgctctcgacggaatcaccagtatcgcc
atcaatccttcatcaaccctggcagttgtcggaggtgctgcaggtggcgtccgtgtcgtg
agtttgaccaagggcgatatcactggcaccctcggtgggcacacggaaggcgagagtatc
gaagccatcaccttcgttgacctcaccggaagcggatccgggcctggtattgccgtcact
ggcgcaaccgatggcaaggcatgcatatgggatctttctaccatgcgtctccgtgcaact
ctacaacatgaagatgccatcacaggcctgctaacccacccagctcccaaggctcacatc
gttgtttctgcatctgccgacaagacactcaaaacgtgggacgctcgaactggtaccctc
atcaagacacataaagcccaccgagctgccgtcctcggctcctccctcggcctgggagga
gcagtcgttattagcgcaggcgacgagggcctctgcgccgtcttcaccaccgagaacaca
gacgaggacggaaacatgcagccttaa
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