Coprinopsis cinerea (gray shag): CC1G_07993
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Entry
CC1G_07993 CDS
T01275
Name
(RefSeq) cleavage and polyadenylation specific factor 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CC1G_07993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_07993
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
CC1G_07993
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
6014831
NCBI-ProteinID:
XP_001838252
UniProt:
A8P258
LinkDB
All DBs
Position
13
AA seq
204 aa
AA seq
DB search
MSNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHP
HILMLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPSNSQQFDQNHGIDNDWEIGD
CLAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYD
NAARYGPQLSAIPHLLSRYNFIYQ
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaccatcgccttatatcccttgtccaactttaccttcagcacgaaggaagcc
caacccgaagaagacccctccgtctcagcgcgcctccaacgcctgcagaacaactatgaa
gactttggcatgcgccgcacagtcgagggcatcctcgtcgtacacgaccacggccacccc
cacatcctgatgctccaaatcgccaacgcctttttcaaactacccggcgactacctcaaa
cccggcgaagacgaaatcgaaggcctcaaaaagcgcctcgacgaccgcctcgctccaccc
agcaactcccagcaattcgaccaaaaccacggaatcgacaatgattgggaaattggcgac
tgcttggcccagtggtggaggccgaattttgagacgtttatgtaccccttcgttccagca
cacatcaccaaacctaaagaatgcaagaaactcttcctcgtccagatgcctgaacgaaaa
gtcctcgcagtcccaaagaacatgaaactcctcgccatccccctcttcgagctctacgac
aacgcggcgcggtacggtccccagctaagtgcgatccctcatttgttgtcgaggtacaac
tttatctaccagtaa
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