Coprinopsis cinerea (gray shag): CC1G_08170
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Entry
CC1G_08170 CDS
T01275
Name
(RefSeq) double-stranded RNA binding domain-containing protein-containing protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CC1G_08170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_08170
03009 Ribosome biogenesis [BR:
cci03009
]
CC1G_08170
03036 Chromosome and associated proteins [BR:
cci03036
]
CC1G_08170
Enzymes [BR:
cci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CC1G_08170
Messenger RNA biogenesis [BR:
cci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CC1G_08170
Ribosome biogenesis [BR:
cci03009
]
Eukaryotic type
90S particles
RNase
CC1G_08170
Prokaryotic type
rRNA processing factors
CC1G_08170
Chromosome and associated proteins [BR:
cci03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CC1G_08170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
6014176
NCBI-ProteinID:
XP_001837616
UniProt:
A8NZ66
LinkDB
All DBs
Position
5
AA seq
435 aa
AA seq
DB search
MNKFGNNLSSLPGFTRCTLVLGQPRTSGTENLIQFGSRAWSSSRPLNSDHSTTQPVEEEG
EDKPTPDLPAELIAMRLNPDFGPNNVNFPPLPEITNRNIELQVFTHRSYHARPTHVFEDH
INDLSPDNERYEHLGDTVLGLVVTNLMFDMFPGLRVGPSTKIRSLVVGNSTLAEISKKYR
LPDRLRLHQAQAITLRASTNVQADVFEAFVGGLFKDQDLPAVQRWLNPLFRPYAKAAYDY
VRKQTNLPPLPPSSHYLSRNGASNNGSSHPEVTMSSANDSQGDYAVGPTIGHLALFNQHL
QRSSRVVEWIYSDGSDPSEGMDTDGGSTACPALNAIENIDGSNKENYANGNSGSHHTPNG
TANGKPNGVNGAKGKWYSDPCVPDHLRIKSSPLNPVWYVKVLVDGEFYGRGRGNTKKAAR
NEAAKEGLVKLGIEV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagttcggaaataatctctcgtcgttaccagggttcactcggtgtacgttggtg
cttggccagcccaggacgagcggtacggagaatctgatacagtttgggtctcgtgcgtgg
agtagctcgaggcctctcaactctgatcacagcaccacccagcctgtcgaagaggaaggc
gaggacaagcccactcccgatctcccagctgaactgatcgccatgaggctcaaccctgat
tttggacccaacaatgtcaactttcctcccctccccgagatcaccaaccggaatatcgag
ctgcaggtcttcacgcatcgaagctaccatgcgcggccgacgcatgtgttcgaggatcat
attaacgatttgagtcctgacaacgagcgctatgagcatctgggggatacagtccttgga
ttggtcgtcaccaatctgatgtttgatatgttccccggacttcgtgttggtccgtccacg
aaaatccgctcgctggttgtgggcaactcgaccctcgccgaaatatccaagaagtataga
ctcccagatagactgcgtctgcaccaagctcaggcgatcacacttcgagcgtctaccaat
gtacaagccgatgtattcgaggcctttgtgggcggtctgttcaaggaccaagacctcccc
gccgtccaacgctggctcaaccccctcttccgaccatacgccaaagcggcctatgactac
gtccgcaaacagaccaacctgccgcctctgcccccttcgtcccactatctctcccggaac
ggcgcctccaacaatgggagttctcatcccgaggtgacgatgtcctcagcgaatgattcc
caaggggactatgctgtcggacctaccatcgggcacctagcgctgttcaatcagcatctg
cagcggtcgagcagggtcgtcgagtggatttactcggatgggagcgatccttctgagggt
atggatacggatggaggctctactgcttgtcctgccctcaacgccatcgagaacatcgac
ggatcgaacaaggagaactatgccaatggcaactcgggctctcaccacacacccaacggc
accgctaatggaaaacccaacggcgtgaatggcgccaagggcaagtggtactcggatcct
tgtgtacccgaccacctcaggatcaagagctcgcctctcaatccggtgtggtatgtcaag
gttttggtggatggcgagttttatggacgtgggcgggggaatacgaagaaggctgctagg
aatgaggctgcgaaggaggggctggttaagttgggtattgaggtttga
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