Coprinopsis cinerea (gray shag): CC1G_08670
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Entry
CC1G_08670 CDS
T01275
Name
(RefSeq) pre-mRNA-splicing factor CLF1
KO
K12869
crooked neck
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC1G_08670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cci03041
]
CC1G_08670
03036 Chromosome and associated proteins [BR:
cci03036
]
CC1G_08670
Spliceosome [BR:
cci03041
]
Complex B
Other components
Prp19-related factors
CC1G_08670
Complex C
CC1G_08670
Chromosome and associated proteins [BR:
cci03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
CC1G_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
HAT
Suf
TPR_2
TPR_19
TPR_16
TPR_11
TPR_12
U3_assoc_6
Mad3_BUB1_I
SNAP
Motif
Other DBs
NCBI-GeneID:
6014219
NCBI-ProteinID:
XP_001837657
UniProt:
A8NZE1
LinkDB
All DBs
Position
6
AA seq
608 aa
AA seq
DB search
MQDGRAPRIKNRAPAAAQERQETAFRAPKQRVENFEELDEYRGRKREEFEERVRRNRGSV
KEWLQYANWEASQNEFARSRSVFERALDVDPSSIQIWLSYTEKELKNRNVQHARNLFDRA
VTLLPRVDQLWYKYVYLEELLGNVSGARQVFERWVKWEPDEKAWMAYIRFEERYQEMERV
SALYERVVAVSPEVKTWIRWARFEEERGCAEKAREVFRTAVEFYGEEPEDVERAQGLYAA
FAKMETRLKEYERARVVYKFALDRIPRSKCAALYDAYTKFEKQHGSTTDLEASVIAKRRI
QNEEEVQRDGRNYDVWFDYVNLEEGVWQSLREEGFSAGERDEQGRRVEEVYERAIALVPP
GDEKRHWRRYIYLWLRYALFEEVERKDYERAREVYKTAISVVPHQKFTFTKLWLSFAKFE
VRMLELGSARKILGTGIGLCPKPSLFRGYIDLEIEVWVMFVCRLASGVRSCAYALRKVLG
VRPHRFDRLGQLSPHVKVWVSYALLEAQDITVIVEMDDGEEREGSASWEPGSCAAGFPER
RATLLEVWELFEGTHGTVEDLKKVRLMKPTAGARRVVDDAGVVTYDGPGLERVTGTDVDC
GLCVRADG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacggtcgtgctcccagaatcaagaaccgggcgcctgctgccgcgcaagagagg
caagaaacggcgtttcgggctccgaagcagcgggtggaaaactttgaagagctcgatgag
taccgtggtcggaaacgtgaagagtttgaggaacgggtcaggcgtaatagaggtagtgta
aaggaatggttacaatatgccaattgggaggcctcccaaaacgagtttgcacgatctcgt
tctgtgtttgagagggctttggatgtggacccaagctcgatccagatttggctgtcgtac
acggagaaggagctgaagaaccgcaacgttcagcatgccaggaatttgtttgatcgtgct
gtgactcttttgccccgtgttgatcagttgtggtacaagtatgtgtacctggaggagctg
ttgggtaatgtcagtggagcacggcaggtttttgagaggtgggtgaagtgggagccggat
gagaaggcatggatggcgtatattagatttgaggagcgctatcaggagatggagagggtt
agtgcgctgtatgagagggtggttgctgttagcccggaggtgaagacttggattaggtgg
gccaggtttgaggaggagagagggtgtgctgagaaagcgagggaggtgtttaggactgcg
gtggagttttatggtgaggagcctgaggatgttgagagggcacagggtttgtatgctgct
tttgcgaagatggagactaggcttaaggaatatgagagggcgagggtcgtgtacaagttt
gctctggaccggatacctcgctctaaatgtgctgcgttgtacgatgcctacaccaagttt
gaaaagcagcacggttccactactgatttggaagcatctgtcatcgctaaacgccgcatt
cagaacgaggaagaggtgcagcgtgatggtaggaattacgatgtctggttcgattatgtg
aatttggaggagggagtttggcagtcactgcgagaagaaggattttcggcgggtgaacgg
gatgagcagggtcgaagagtagaagaggtctatgagcgtgccattgccctagttcctccg
ggagatgagaaacgacattggcggaggtatatatatttgtggctccggtatgccttgttt
gaggaggtggaacggaaggactatgaacgagctcgggaagtttacaagacggctatctct
gtggttccccaccaaaagttcacctttacgaaactttggttaagttttgccaagtttgag
gttaggatgcttgagttgggttcggcgcgcaagattcttggtacgggaattggactttgt
ccgaagccttcgttgttcaggggttatatcgatctggaaattgaggtatgggtaatgttt
gtttgtcgtttagcttcgggagttcgatcgtgcgcgtacgctttacgaaaagtacttgga
gtacgaccccaccgattcgaccgcctgggtcagttgagtccgcatgtcaaggtttgggtg
tcgtatgcccttttagaggcgcaggatattacggtcattgtggagatggatgatggagag
gagagggagggaagtgcgtcatgggaacccgggtcttgcgcggcaggttttccagagagg
cgcgccacgttgttggaggtctgggaattgtttgaaggtacccatggaacggtggaggat
ttgaagaaggttaggctgatgaagcccacggctggcgcacgtcgggtggtcgatgatgcg
ggggttgtgacctacgatggcccgggcttggaaagagtcacaggaacagacgtcgattgt
ggactctgtgtccgtgcagatggatga
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integrated database retrieval system
