Coprinopsis cinerea (gray shag): CC1G_09103
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Entry
CC1G_09103 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CC1G_09103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_09103
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CC1G_09103
mRNA degradation factors
3'-5' decay
Pan complex
CC1G_09103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
6010651
NCBI-ProteinID:
XP_001834146
UniProt:
A8NJ49
LinkDB
All DBs
Position
10
AA seq
677 aa
AA seq
DB search
MSYFVRAQSTPVKIARPPTTEPESPKQSAGQTRKDSVQRQCRNIVIYGHCKYQDKGCIYY
HPPTEPEPPAQAPPPSTGGTRPESPVVTGTLSAQAVNAPVFVPKSASAIAAGIASAASTP
AATTDGSTYDGASQSEMGYQEYDQSGYENYTEDSQMEGVTQKMEDLSTQYYGDYSDAAAA
AAAAAYYAAAPPVFLRQPLNYHLYTPTAYPDFQPSTVNTHFVPPSADLRQTLQERSETIR
GIAPPGLNLPEELQGYHTLVPLEPTGPGTERRKFGNWYCTVYRAIKASDGLPYVLRRIES
KSFSEPQRYAPLLTSLDRLSHPGIVSLKEAFTTRSFDDNSLVVVYAYHPNAKTLYDTYLK
QNKQTSSTSTTTGSTGSRFGRYQSGTTHYTPQASPAIGQGPAIPERTIWSYIVQIATAIK
RVHEAGHALRGLDASKVIITGQNRIRISACGTMDVLMHDVPQDIHLMQQEDLTQFGRLIF
ALCCGSTNASSGPHFQKSVDHLLRVYGQEIKSLALWLISKQTMKSIDQVLDSIRHRVLLE
QEEALLAVDRLEVELQSELENARLVRLMTKLGFINERPEFAREPRWSETGDRYIIKLFRD
YVFHQVDEHGNPVLDMSHVLTCLNKLDAGTDEKLMLVARDEQSCLVVSYKEVKNCIEGAF
GDLAKAAIASPAAYKHR
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacttcgttcgagcccagtcgactccggttaagatcgcgaggccgccgaccact
gaacccgaatcaccgaaacagtctgcaggacaaacgcgaaaagattccgttcagagacaa
tgtagaaatatagtaatctatggacactgtaaataccaggacaaaggctgtatctactac
caccctccgacagaacctgaaccgccagcccaagccccgccccccagtactggaggcaca
cgccctgaatcacctgttgtgactggcactctgtcagcccaggccgtcaatgctccggtg
tttgtgcccaaatccgcctccgccatagctgctgggatcgctagcgctgcatcaacccct
gcagctactactgatggctcaacctacgatggcgcgtcccaatctgagatgggttatcag
gagtatgaccagtctggctatgagaactacactgaagattcccaaatggaaggcgtcacc
cagaaaatggaggatctcagcacccagtactatggcgattacagcgacgctgctgctgct
gccgcagccgcggcctattatgcggcggccccaccagtcttccttcgacaaccgctcaac
taccacctctatacgccgacggcctatcctgatttccaaccttctaccgtcaacactcac
ttcgtacctccttccgccgatttgagacagactcttcaagaacggagtgagaccatccga
gggatcgctcctccaggcttgaacctccccgaggaactacaaggctatcacaccttggtg
ccgttagaacccacaggtcccggcaccgagagacgcaagttcgggaactggtactgcaca
gtgtaccgggctatcaaagcttcagatggattgccttacgtccttcgaaggatcgagagc
aagtccttctctgagcctcaacgatacgcccctttacttacatcactcgatagattatcg
catccagggatcgtcagcctcaaggaagctttcacgacccgatcatttgatgataactct
ttggtcgtggtctatgcgtaccacccgaatgccaagacgctttacgacacgtatctcaag
cagaacaaacaaacatcaagtacttctacgaccacgggatccacaggtagtcgcttcggg
cgctatcaaagtggaactacgcactacaccccacaggcaagccctgccattggtcaaggg
cctgccatccctgagcgaacaatctggtcatacatcgtccagatcgccactgcgatcaag
cgggtgcacgaggctggccatgccttgcgaggtctcgacgcgagcaaggtcatcatcact
ggtcagaaccgcattcgaatttccgcctgcggcacaatggacgtcttgatgcacgacgtg
ccgcaagatattcacctgatgcagcaagaagatttaacgcagtttgggaggctaatcttt
gctttgtgctgtggaagcaccaatgcttcgagtggaccccatttccagaagagcgtggat
catctgctacgagtctatgggcaagaaattaaaagtcttgctttgtggctgatcagcaag
cagaccatgaagagtattgaccaggttttggatagcatcaggcatcgtgttcttctagaa
caagaagaggctttactcgctgtcgaccgccttgaggttgaactccagagtgaactggag
aatgcccgcttggttaggttgatgacgaagctcgggttcatcaatgagcggccagagttt
gcacgggagccccgatggtcagaaacgggtgaccggtatatcatcaaactgttccgtgac
tatgtcttccatcaagtcgatgagcacggcaatcctgtactggacatgtcgcatgtgttg
acatgtctgaacaagttggacgctgggacggacgaaaagcttatgcttgttgcgcgggat
gaacagagctgtcttgtggttagctataaggaggtcaagaactgcattgagggtgctttc
ggggatctcgcaaaggcagcaatcgcatcgccagccgcgtacaagcatcggtaa
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