Coprinopsis cinerea (gray shag): CC1G_09505
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Entry
CC1G_09505 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CC1G_09505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_09505
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CC1G_09505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
EAD11
HWE_HK
Motif
Other DBs
NCBI-GeneID:
6014519
NCBI-ProteinID:
XP_001837954
UniProt:
A8P0S5
LinkDB
All DBs
Position
6
AA seq
561 aa
AA seq
DB search
MSLFGGGSAFGSTNTGGGLFGQQQQQQQPQQQQPSLFGNTGGTGTTAPLQAQPTQPAFGA
STTTGTSGGGLFGSTNASTNTGGGLFGNTGQQNTNTGTGTTGGLFGNTSTTGTGTGGGLF
GNTNTNQQQGTTGGGLFGNTNTNQQQGTTGGGLFGNTNANQQQQQQPATGGGLFGSTTTQ
QPATGGGLFGNTQQQQQNTGGGLFGKPAGGGLFGSTSTTTNTGGGLFGNTQQQQQQQQQQ
QPQQQQGFGGLFGQSTNTGAGTGSLFGNKSTLGTSALGQPGATGTGTGGLLGTSTLGTSS
LLPSRSGLGMGGSVLSPSNGTTMESKIEAIYNAWNPASPLCRFQHPFYNLVNPNEVGLYG
RPPNVLNDAVWEKAVQGNPDPKCFVPVVAIGFDDLRERVDGQSKKATEQSQMLSDLKQRL
AALSTKHDVSNVSRLQRASVQQAQITHRLLKLIQHLHLLIPAVRSSSIRPEEEQLRGKLE
EVEDEGKNVGGGEWAVVDEEGMAQIVQVLKEQQIGLAHLTNILQKNQKDVAIVLGQSNSD
DLQDGESLWSSTSTLRASALR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctatttggaggaggaagtgcctttgggtcgaccaacaccggtggagggcttttt
ggccaacagcagcagcaacaacaacctcaacaacaacagcccagtttgttcggaaacacg
ggcggaactgggacgactgcacctctgcaagctcagcccactcagcccgcttttggtgct
agtactacgacgggtacgagtggaggagggctttttggttcgactaacgcctcgaccaac
acgggcggtgggttgtttggcaacactggccagcagaatacgaacacggggactggtacg
actggagggctgtttgggaacacgagcactacgggcacggggacaggtggagggctgttt
gggaatacgaatacgaaccaacagcagggcacgactggtggaggtctatttgggaacacc
aatacgaaccaacagcagggtacgacgggtggaggtctgtttgggaacaccaatgccaat
caacagcaacagcagcaacctgcgactggaggtggacttttcggttcgaccacgacacag
caacctgccactggaggcggtctgttcggcaacacgcagcagcagcagcagaatacgggt
ggtgggctgttcgggaagccagctggagggggactgtttggatccaccagtaccacgacg
aatactggagggggattgtttgggaatacgcagcagcaacagcagcagcaacaacaacaa
cagcctcaacaacaacaaggtttcggtggtctctttggccagtcgaccaacaccggtgcg
ggtactggatcgctctttggcaacaagagcacactaggcacgagtgcgctcggtcagccg
ggtgccacgggtactggaacaggagggctgttgggcacctcaacgctcggtacgagcagt
ttgttaccgtcgcgatctggtttgggaatgggcggatcagtgttaagcccatcgaatggc
accaccatggagagcaagatcgaagcgatttacaatgcgtggaatcctgcttcaccgctt
tgtaggttccagcatcccttctataatctcgtcaatccgaacgaagtagggctgtatgga
cgaccacccaacgtcctcaacgatgcagtgtgggagaaggccgttcagggtaaccctgat
cctaaatgcttcgtcccagtagtcgccatcgggttcgacgacctccgtgaacgcgtcgac
ggtcaatccaaaaaagcaaccgaacagtctcaaatgttatccgacctcaaacaacgcctc
gccgctctctccacgaaacacgacgtctccaacgtatcccggctccaacgcgcgtcggtg
caacaggctcaaatcactcatcgccttttgaagttgatccagcatctgcatttgttgatt
ccggcggtgaggagtagtagtatacggcctgaggaggagcagttgaggggcaagttggag
gaggtggaggatgaggggaagaacgtgggcgggggagagtgggctgttgtggatgaggag
gggatggcgcagattgttcaggttttgaaagaacaacaaatcggacttgcgcatcttacg
aatatcctgcagaaaaaccagaaggatgtggcaattgtgttgggtcagtcgaattcggat
gacctacaggatggagagagtttgtggagttcgactagtacgcttcgtgctagtgctttg
cgatag
DBGET
integrated database retrieval system
