KEGG   Coprinopsis cinerea (gray shag): CC1G_09807
Entry
CC1G_09807        CDS       T01275                                 
Name
(RefSeq) hypothetical protein
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
cci  Coprinopsis cinerea (gray shag)
Pathway
cci03022  Basal transcription factors
cci03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CC1G_09807
  09124 Replication and repair
   03420 Nucleotide excision repair
    CC1G_09807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cci03021]
    CC1G_09807
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_09807
Transcription machinery [BR:cci03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CC1G_09807
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CC1G_09807
SSDB
Motif
Pfam: Tfb5 Binary_toxB_3 NAD_binding_7
Other DBs
NCBI-GeneID: 6011399
NCBI-ProteinID: XP_001834880
UniProt: A8NMB1
LinkDB
Position
12
AA seq 65 aa
MRAIKGVLLTCDPAVKQILLAMNEKQNFIIEDLDDYHLVIKADDEMRVRRELEAELEKNT
YSLDG
NT seq 198 nt   +upstreamnt  +downstreamnt
atgcgagcaatcaaaggcgtcctgttgacctgcgacccagcagtgaaacaaatcttgctc
gccatgaatgaaaaacagaacttcatcattgaagacctggacgactaccatctcgttatc
aaggccgacgacgagatgagggtaaggagagaactcgaggctgagctcgagaagaacacc
tattccctggacggatag

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