Coprinopsis cinerea (gray shag): CC1G_09856
Help
Entry
CC1G_09856 CDS
T01275
Name
(RefSeq) hypothetical protein
KO
K14409
protein SMG7
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CC1G_09856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cci03019
]
CC1G_09856
Messenger RNA biogenesis [BR:
cci03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
CC1G_09856
mRNA cycle factors
Common to processing body (P body) and stress granule
CC1G_09856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
6014436
NCBI-ProteinID:
XP_001837874
UniProt:
A8P0E8
LinkDB
All DBs
Position
6
AA seq
1076 aa
AA seq
DB search
MSEQPITIAREAKNIYQSLKELLKTKEPFDKELEFQRKNLRKRYLSLLLLHPYAKESKDV
ENHLWMQTSYASISSYKERIAIIDRAIQAHARQPQGQPGQQRQQRHGPVEHRKLLSRFRQ
FLAEEEKFWIHLLLRMYRSFGLEEARPALTALGLLHDNQDLGEAEGQDPPHSRTSFPEEP
ETSVFPSNPAERESRLAILSKALICLGDIARYRELYNEGGGRPRAGHEGGRPARRGRRGG
PPETIVAQPRVYDNAQQRYEQARLLVPNEGNPFHQLAILATYRKDTFASVYYYYRALSVR
QPYETAGDNLATVLQKASDQWRRTRKERERMLSSGPLDIKDRVMLFKERTVVLHSLWRKG
IDKIDSKFKEHDKTVYQDFYELVAERHLPIDMISHAIVLSQGALWKHKMIRDGRRQEARP
VEPSVTTEWRILRHLMDMHFALLEVGRDQLKDLPSMDKVDNDLAQRITAIFRRTLPALRI
ASKWLRANFAYVMTDLEFQAYQEKEKLRSVAVEKKCPEKISAHSVHSIRFWKGYAQFVAA
LSQAFPTNRLPSLTAPLEEDVDLRGFLPLKKLMVDAKNSASDVVNGNGNVVESPHPNEEQ
LMRISDLLADAQALVEAKNSPLTLINQLIVFDDSMVEPRTSTISEPAKPLEPIASRQQQI
MNQIRDKSAEVPCLREEDVMTEGTSRTDDDVLKAAFQHIGGDAPDVPDDDDDEIVLFNPK
ASLSPALSPLLQTTPITPVRPLNGSAAAKAFPSPPLAHNKPSPLIGKTPISSPRVSTIHA
TTAQDLLQDVMNVGRKPGSGLVPPSTVDPSGIQPPLLFGSELSHRPSLISSNAPSSIWSA
GHDEQGLKFGSTTSPGHSHNHANPHHSLSPRLNYAHSVSGPAQDLTTPSIWAPSHTSSIQ
SPQLHLGGSLPSGTSQPHQPNNAGVIGSGLHHRLPSASHTMAYSGSLSPHRVEQQRHQYT
FSHSSSTSSVNVPKPHHQSFYSADLRNNLGPGGGLGGTSLSSPSLGNYYHQPQSQQSTST
NGHSQGLGHLDPFARLGLYPPLSQTHSQPPPSLQSHTHGNGLTSPQSLSHLWGNVG
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagcctataactatcgcccgagaggcgaagaacatttatcaatcactaaaa
gaactgttgaaaaccaaagaaccgtttgacaaggaactcgagtttcagaggaagaatttg
agaaagcgttatctctccctattgctcttacacccgtatgcaaaagagtctaaggatgtc
gagaaccacctatggatgcaaacgtcttacgcatccatatcctcgtataaggaacgcatc
gccataatcgaccgtgctatacaagcacacgcccgtcaaccacaaggacaacctggccaa
caacgacaacagcgacatggacctgtggaacaccgcaaattgctttcgagatttcggcag
ttcctcgcagaagaggagaaattctggatacacctcctccttcgaatgtaccggtcattc
ggccttgaagaagcgcgccccgctctgacagcattgggacttctacacgacaatcaagac
ctaggggaagccgagggtcaagatccgccccacagtcgcacctcattcccggaagaacca
gagacctctgtatttcctagtaatccagcggagagggaaagccgactggctattctgagc
aaagccctcatctgcttaggcgatattgcgcggtaccgagaactctacaacgaaggcggt
ggtcgtcccagggctggacacgagggtggtcgtccggctagacgaggaaggaggggaggc
cccccagagacaattgtagcacagccccgggtttacgacaacgctcagcaacgatatgaa
caagctcggcttctggttcccaatgaaggcaatccattccaccaactcgccatcctcgca
acgtataggaaagacacattcgcatcggtctattattactaccgtgcactatctgtgcgc
cagccatacgagacagctggagacaaccttgctaccgtccttcagaaggcttcggaccag
tggaggcggacgaggaaggaaagggaacggatgttgtcatctggccccctcgatatcaag
gacagggtgatgttgttcaaggagaggacagttgtgcttcattcactgtggcgtaaaggc
attgacaagatcgactcgaagttcaaggaacacgacaagaccgtctatcaagatttttac
gagttggttgcagaacgtcatcttcctattgacatgatctctcatgccatcgtcctttcg
caaggggctctatggaagcacaaaatgatacgagatggacgtcgtcaggaagctagacca
gttgagcccagtgtcaccacagagtggcgcattctccgccatctcatggacatgcacttt
gctttgttggaggtcggccgggaccagcttaaggatctcccttcgatggataaggtcgac
aacgatctagctcagcggataacagctatcttccgacgaaccctccctgctttgcgcatc
gccagcaaatggctacgcgccaacttcgcctacgtcatgaccgacctcgagtttcaagct
tatcaagagaaggagaagcttcggagtgttgcggtggagaagaaatgcccggagaagatt
agtgcccactcggtacactctatacggttttggaaaggatatgctcagttcgtggcagcc
ttgtcgcaagccttcccgacgaacaggctgccttccttgacggcaccgttggaagaggat
gttgacctgagagggttccttcctctgaagaagttgatggtagatgcaaagaacagtgct
tctgacgtcgtcaacgggaacgggaatgtggtagagagtcctcatccgaatgaggagcag
cttatgagaatatcggaccttctcgcggatgcgcaggcattggtggaagcaaagaactct
cctctcacattgataaaccagttgattgtcttcgacgacagtatggtggaaccgcgcact
tcgacgatctccgaacccgcaaagccgctagaaccgatcgcatctcgtcaacagcaaatc
atgaaccagattcgggacaagagcgctgaagttccctgtctgcgcgaggaagacgtgatg
acggaaggtacatctcgaaccgacgacgacgttctcaaagctgcattccagcatattggt
ggagatgctcccgatgtccctgacgatgacgacgacgagatagtccttttcaaccccaaa
gcatcgctatcccccgcgctgtcaccactcttgcaaaccacgcccatcactccggtcagg
ccgctgaacggctcagcggccgcgaaagctttcccgagccctcctctcgctcacaataag
ccttcacccctcattggaaagacgccgattagtagtccccgcgtctctacaatccacgct
actacagcgcaggatctccttcaagatgttatgaacgttggtcgcaagcctggaagtgga
ctcgttccaccttcaaccgtcgatccttccgggatccagccgcctttgctatttggttcg
gaactctcacatcgacccagtctcatttctagtaatgcgccgagctcaatttggtcggct
ggacatgatgaacaaggcttgaagttcgggtcgactacttccccaggacacagtcataac
cacgcgaatcctcaccattccctctcccctcgactaaattatgctcacagcgtttccggt
cctgctcaagacttaaccaccccgtcgatttgggcgccgtctcatacttccagtatccag
agccctcaactgcatcttggaggtagtttaccgtctggaacaagtcaacctcaccagccc
aacaacgcgggcgtaattggaagcggcctccaccaccgactcccgtccgcgtctcacacc
atggcgtattccggcagtctgagcccacatcgcgttgaacagcaacggcaccagtatacc
ttctctcatagctcctccacaagctctgtgaacgtcccgaaacctcaccaccaatcgttc
tattcagctgatcttagaaacaatcttggtcccggtggagggcttgggggaacgtcgctg
tctagtccatcgctggggaactattatcaccagccgcaatcccagcaatcgacatcaaca
aatggtcattcgcaaggcctcggtcacctggatcccttcgcaaggctcggactctaccct
cccctttcccaaacccattcacaaccgcctccatctctccagtcgcatacccatgggaat
ggactgacctcgccgcaatccctttcgcatctgtggggaaacgtggggtag
DBGET
integrated database retrieval system