Coprinopsis cinerea (gray shag): CC1G_10063
Help
Entry
CC1G_10063 CDS
T01275
Name
(RefSeq) rab guanyl-nucleotide exchange factor
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci04138
Autophagy - yeast
cci04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CC1G_10063
04148 Efferocytosis
CC1G_10063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cci04131
]
CC1G_10063
Membrane trafficking [BR:
cci04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
CC1G_10063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
TPR_Vps41
Clathrin
TPR_4
TPR_19
CNH
RPN7
Motif
Other DBs
NCBI-GeneID:
6013115
NCBI-ProteinID:
XP_001836569
UniProt:
A8NUZ3
LinkDB
All DBs
Position
4
AA seq
819 aa
AA seq
DB search
MTAVDIVTPLPTTASTGAFTVHIKDSEALITKDVEGYFVGPDAKVSRTTTVEWPAPPEDV
AAVKPYIVSVLPAGTVPVVQSDTASTSTTSQSSVYPTSVIQVYSSLSLHAAQTLPFPFNS
PSGSQTSITTPPANATLRLLTPTSSIKSPLFLISTPTDKTAATNEGSSVWQFTMKPWPEQ
LDELVLAGHYSDALSLLDTLDEASLPDKDQRRTRIRALNAVAQFRAGKFDEAIDTFIALD
FNPAKVVALYPEAVSGRLAVPQERWIPLYGGPVPVEPSSGEDSQSVASHESGKQGSAEGG
SSGATGDHPGSVPTGTSLRNRLQMKTTFGMLIPGGGGKDDDAVSVSSKRRVPIHETLVRF
LTDRRPKLFKALEGVKITPENQTEQYPPLSKTSVDDLYTLPDAALSALTPEQLLRFAQII
DTALYKAYLIIRPTLLSSLCRVANWCEVSELEEDLRKRKKFSELKDLYHGKGMHAKALDL
LREVAEDEDDLEDKLDPSIRYLQRLGPAHLAQIFESARWIFDTDKDMAFNIFLSEDVELP
YRPVADYLEKIDPKLCIRYLEHIIFEKEDQSSEFHDRLVELYLSQTLAAKRRGDGDLEHH
MYSKLLQFVDSNQFFTIDRLYGLLSPTDLYEARAILLGRLGRHDQALELYVYRLNDYLKA
EEYCKRVYQSGTPTSGIFLTLLRIYLRPTSQSVDTSKLLQPALDLIRRHSPRLDSVETLQ
LLPPLVTAYDVKEFLIDALRVPVFDTRVITQISKARNDHLARKLVGLQTRRVKVTDTRIC
PQCHKRIGNSVIAVHSPHGEVTHYNCREPFARKLAETRR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggtggacattgtgacacccctaccgacgactgcgtcgacaggggctttcaca
gtccatatcaaggactcggaggccttgatcacgaaagatgtggaaggatatttcgttgga
ccagatgcgaaggtgtcaaggacgaccacggtggaatggcccgcacctcccgaggacgtt
gctgccgtcaagccctacatcgtttccgtcctcccagctggaaccgttcccgtcgtacaa
agtgacactgcttcgacatccacgactagccaatcctctgtatacccaacatcagtcatc
caagtgtattcctcgctttccctccacgccgcccaaactctgccattccctttcaactcc
ccgtctggatcccaaacttcgatcacgactcctccagccaatgctacacttcgcttgctt
acaccgacatcgtcaatcaagtctccgctcttcctgatcagtacgcccactgacaagact
gcagcgaccaatgagggcagttcggtatggcaattcaccatgaagccatggccggaacaa
ctggacgagctagttttggccggtcactacagtgatgctttatccctgctggatacgttg
gacgaggcctctctcccagacaaggaccaacgtcggacgagaatacgagctctaaacgcc
gtcgcgcagttccgcgccggaaagttcgacgaagccatcgacacttttattgcactcgac
tttaaccctgccaaggtcgtagcactctatccggaggccgtgtcgggacggttagcagtc
ccacaggagcggtggatccctttgtatggtgggcctgtacccgtggaaccatcctcggga
gaagattcacaatcggtcgcttcacacgagagtgggaagcaaggttcggcagagggtggt
agtagtggtgcgaccggtgatcatcctggctctgtacccaccggtacatcgttaagaaac
cggctgcaaatgaagacgacatttgggatgctgattcccggaggcggaggcaaagacgat
gatgccgtttctgtgtcgagcaagcggagggtaccgattcatgagactttggtccgattc
ttgacagaccggcgtcccaagttgttcaaggctttggagggggtcaagatcacaccagag
aaccagacggaacagtaccctcctttgtccaagacatctgttgacgatctgtataccttg
ccggacgctgctctttcggcgctcacaccagagcaattactccgctttgcgcagattatc
gacacggctctgtacaaggcgtatctgatcatccggcccacccttctcagttcactctgt
cgtgtagcgaactggtgtgaagtatctgagcttgaggaggatcttcggaagcgaaagaaa
ttctccgagttgaaggacttgtaccatggcaagggaatgcacgcgaaggccttggatctg
cttcgagaggtcgccgaagacgaggatgacctcgaggacaaattggacccttcgatacga
tatcttcagcgcctaggtccagctcatctcgcccagatcttcgaatccgctcggtggata
ttcgacaccgacaaggatatggccttcaacatattcctttccgaggatgtagaactgcca
tatcgacccgtggcagactatctggagaagattgatcccaaattgtgcattcgatacctt
gaacatatcatctttgagaaagaagatcagtcttccgagttccacgaccggctggttgaa
ctctatctcagccaaacacttgcggcgaagagacggggtgatggagaccttgaacaccat
atgtactccaagctgctccagttcgttgacagcaaccagttctttaccatcgacaggctt
tatggattgctctccccgacggatctttatgaagcccgcgctatcctccttggcagatta
ggacgacacgatcaggccttggagctatatgtgtaccgcttgaacgactacctaaaggct
gaagagtattgcaaacgagtgtatcaatcgggaacaccaacgagcggaatcttcctcacc
cttctccgaatctacctccgcccaacatcccaatccgtcgacacctccaagctcctgcaa
cctgccttggacctcatcagaagacacagtccgcgtttagactctgtcgagacacttcaa
ctgctccctccgctcgtgacagcgtacgacgtgaaggagttcttgatcgatgcactcagg
gtacccgtgtttgacacgagagtgatcacccaaattagcaaggctaggaatgatcatctg
gccaggaagttggttgggttgcagacgagaagggtgaaagtgactgatacacggatatgt
cctcagtgtcataaacggataggcaacagtgtgattgccgttcattcccctcatggtgaa
gtaacgcactataattgccgtgaaccctttgctcgtaaactggctgagacgcgccggtga
DBGET
integrated database retrieval system
