Coprinopsis cinerea (gray shag): CC1G_10289 Help Entry CC1G_10289        CDS       T01275                                  Name (RefSeq) nuclear matrix protein NMP200   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism cci  Coprinopsis cinerea (gray shag) Pathway cci03040   Spliceosome cci04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cci00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     CC1G_10289   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     CC1G_10289  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cci03041]     CC1G_10289    04121 Ubiquitin system [BR:cci04121]     CC1G_10289    03400 DNA repair and recombination proteins [BR:cci03400]     CC1G_10289 Enzymes [BR:cci01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      CC1G_10289 Spliceosome [BR:cci03041]  Complex B   Other components    Prp19 complex     CC1G_10289  Complex C    Prp19-CDC5 complex     CC1G_10289 Ubiquitin system [BR:cci04121]  Ubiquitin ligases (E3)   U-box type E3    CC1G_10289 DNA repair and recombination proteins [BR:cci03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     CC1G_10289 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_WDR75_1st U-box WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_WDR41 zf-Nse Rtf2 Beta-prop_IFT140_1st Beta-prop_VPS8 Motif Other DBs NCBI-GeneID:  6005043 NCBI-ProteinID:  XP_001828618 UniProt:  A8N170 LinkDB All DBs Position 1 AA seq 506 aa AA seqDB search MFFCAISGEPPQEPVVSAKSGKVYEKRLIVKYIHENGTDPITGDKLEESDLIAIKASPEN APPRPPTNTSIPALLQLLQNEWDAMVLSTHALEQKYNATRQELSYALYSQDAANRVVARL IRERDAAREALANVQASMGIAPSQPTGGEDVEMAENGGVEEGLPADIVTQIDETHAVLSA ARKKRKTPPGYAAPAEVKTYKATHTIPSLHSASPAGITSIALSTSNPSQFLTGGNDHIVQ LYDRSTDKVLASLKGHSKKVNHVAFREREGDNTLLLSAGADKIAKIWGHDGASGEYIPKA TIRTHKGELTGLAVHPTKTLLALSSVDKTYSLHDLSTFQQVFRSAPTDEPFSSMAVHPDG TFLAIGTPTSTIHIYDVRAGAIAASLTPPDAVPFTVHTLSFSENGYNLVAPNSLSSIALW DLRKEKITASIDLGDDFKVNKVLCDASAQFIGVAGNQGARIFAQKSREELLRLEEGGEVS DFAFGAQGKEIWGATGREVRIWGASA NT seq 1521 nt NT seq  +upstreamnt  +downstreamnt atgttcttctgtgctatctctggagagcctccccaggagcccgtcgtgtctgcaaagtca ggcaaagtttacgaaaagcgactcatcgtcaagtatattcatgaaaacggaacagatcct attactggggataaactggaggagtctgacttgattgcgattaaagccagccctgaaaat gctcctcctcgacctccaacaaacacctcgatacctgctttgctccaacttttgcagaat gaatgggacgctatggttctaagcacacatgcgctggaacaaaagtacaacgccactcga caggaactcagctacgcactctacagccaggatgctgccaatcgtgtggttgcacgattg attcgtgagcgtgacgcggcacgagaggctcttgcaaacgtgcaagcttccatgggaatt gcaccttcccagcccaccggcggcgaggacgtcgaaatggcagagaacggaggcgttgag gaaggacttcccgcagatatcgtcacccaaatcgacgagacgcatgcggttctgtcggca gcccgaaagaagcgaaagactcctccaggatacgccgccccggcagaggttaagacttac aaggctacccacaccatcccatccctccattccgcttctcctgccggcatcacctccatt gctttgtccacgtccaacccttcgcaattcctcacgggcggtaatgaccatatcgtgcag ctctacgatagaagcaccgacaaggttctcgcttcacttaagggtcattcgaagaaggtg aaccacgtcgccttccgagagcgcgagggtgacaacaccctgctcctctcggctggtgcg gacaaaatcgccaagatctggggacatgacggcgcgtcgggcgagtacatccccaaggcc accatccgaacccacaagggtgaactcaccggcctcgcggtccaccccaccaagaccctc ctcgccttgtcctctgtggacaaaacctactcgctgcacgatctctcaacattccagcaa gttttccggtctgcgccaacggacgagccttttagctcgatggctgttcaccccgacggc accttcttggccattggaacgcccacctctactatccacatttacgacgttcgcgctggt gctattgcagcctcattgacaccccccgatgccgtccccttcaccgtccacacgctgtcc ttctcggaaaacggatacaatctcgtcgcccccaactccctctcctccatcgctctttgg gacctccgaaaggagaagattaccgcttccatcgaccttggagatgactttaaggtcaac aaggtcctttgcgatgcttccgcacagttcatcggtgttgctggtaaccagggtgctcga atcttcgctcagaagtcgcgcgaagagctgttgcgcttggaagaaggtggagaagtcagc gactttgcgtttggagcacaaggcaaggagatttggggtgctactggacgggaggtcagg atttggggagcctccgcttaa

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