Coprinopsis cinerea (gray shag): CC1G_10325
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Entry
CC1G_10325 CDS
T01275
Name
(RefSeq) pre-mRNA-splicing factor SYF2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
cci
Coprinopsis cinerea (gray shag)
Pathway
cci03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cci00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CC1G_10325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cci03041
]
CC1G_10325
Spliceosome [BR:
cci03041
]
Complex B
Other components
Prp19-related factors
CC1G_10325
Complex C
CC1G_10325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
6014467
NCBI-ProteinID:
XP_001837904
UniProt:
A8P0J3
LinkDB
All DBs
Position
6
AA seq
402 aa
AA seq
DB search
MPPKGSKKKGGRKAKAAVVEEIPNVEPEVETPQEDTQMNVDEQTTTEQPEASTSAKLAST
VTNAVVEAEHAVEHAVEKVVEKVAEVGGAAKEFVEEMTMTGVESGSSGNASESATPGAQE
SGKDEPMEQDSSREASQSAEAESKPKLTLEERRAKMEALRKKMREGTMANRQSLAEETAK
AKLTARELARLERQRKLAETLRLKADAEERGEDVERRKNWEYTIEENDEWEKKLARKKRR
ADFEFHDDAQASRRRYKKDLDQIKPDLEAYNRQKALAMGLNPSANALTSFSSTDVVASSS
SSALQAVSSEEQRIAAENLYRDANTLIYGDSKPSDEAIDRVVGKINKDIDKKAKFHRKRL
NEDEGDITYINEHNRVFNKKIARYYDKYTAEIRASFERGTAL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaggatccaagaagaagggcggacgcaaagccaaagctgcagtcgtcgaa
gaaattcccaatgtcgagccggaggtcgaaacgcctcaagaggacacccaaatgaacgtt
gacgaacagacaaccactgaacaaccagaagcctcgacatcagctaaactcgcctcgaca
gtcaccaatgccgtggtcgaagccgagcatgctgtagaacacgctgttgaaaaggtggta
gaaaaggtggccgaggtcggtggggcggcgaaggagtttgtcgaggagatgacgatgact
ggtgtggagagtgggagcagtggaaatgcgagtgaaagtgcgacgccgggcgctcaggag
tcgggcaaagacgaacctatggaacaggatagctccagggaggccagtcagagcgctgag
gcggaatcgaaaccgaaactgacgcttgaagaacgaagagcaaagatggaggctttgagg
aagaagatgcgtgaagggaccatggccaatcgacagtcattagctgaagaaacggccaaa
gccaaactcactgctcgcgaattggctcggctcgagagacagcgcaaacttgctgagaca
ctgcggttaaaggcagatgcggaggaaagaggagaggatgtggagaggaggaagaattgg
gagtataccatcgaagaaaatgatgaatgggaaaagaagttggcaaggaagaagcggaga
gcagactttgaattccatgatgatgcccaggcatcgagacgccgatataagaaggattta
gaccaaatcaaacccgacctagaagcctacaaccgacagaaggctcttgctatgggcctc
aatccctcggcgaacgctctcacgtcgttcagctcgacggacgtagtggcgtcgtcatct
tcgtctgctttgcaggccgtgtcaagtgaagagcagcgtattgccgctgagaacctttac
cgtgacgcaaacaccctcatctacggcgacagcaaaccctccgacgaggcaatcgacaga
gtcgttggcaagatcaataaggacatcgacaagaaggccaagttccatcgcaagcgtctc
aacgaagacgaaggcgacattacctacatcaacgaacacaacagggtgttcaacaaaaag
attgccaggtattacgacaagtacactgccgaaatcagagcgagcttcgagcgtggtact
gctctctga
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